Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.62■□□□□ 0.89
Chd1lQ9CXF7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd1lQ9CXF7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Chd1lQ9CXF7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd1lQ9CXF7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Chd1lQ9CXF7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd1lQ9CXF7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd1lQ9CXF7 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Chd1lQ9CXF7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.62■□□□□ 0.89
Chd1lQ9CXF7 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd1lQ9CXF7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd1lQ9CXF7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1lQ9CXF7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1lQ9CXF7 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1lQ9CXF7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1lQ9CXF7 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.61■□□□□ 0.89
Chd1lQ9CXF7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1lQ9CXF7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1lQ9CXF7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Chd1lQ9CXF7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.61■□□□□ 0.89
Chd1lQ9CXF7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1lQ9CXF7 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1lQ9CXF7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1lQ9CXF7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.61■□□□□ 0.89
Chd1lQ9CXF7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.61■□□□□ 0.89
Chd1lQ9CXF7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd1lQ9CXF7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Chd1lQ9CXF7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC20.61■□□□□ 0.89
Chd1lQ9CXF7 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Chd1lQ9CXF7 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd1lQ9CXF7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd1lQ9CXF7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chd1lQ9CXF7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Chd1lQ9CXF7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd1lQ9CXF7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Chd1lQ9CXF7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.6■□□□□ 0.89
Chd1lQ9CXF7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Chd1lQ9CXF7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Chd1lQ9CXF7 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Chd1lQ9CXF7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1lQ9CXF7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1lQ9CXF7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1lQ9CXF7 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1lQ9CXF7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1lQ9CXF7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1lQ9CXF7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1lQ9CXF7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.59■□□□□ 0.89
Chd1lQ9CXF7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1lQ9CXF7 Gm12251-201ENSMUST00000117893 792 ntBASIC20.59■□□□□ 0.89
Chd1lQ9CXF7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1lQ9CXF7 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1lQ9CXF7 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.59■□□□□ 0.89
Chd1lQ9CXF7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1lQ9CXF7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd1lQ9CXF7 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.58■□□□□ 0.89
Chd1lQ9CXF7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd1lQ9CXF7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd1lQ9CXF7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Chd1lQ9CXF7 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd1lQ9CXF7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd1lQ9CXF7 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.58■□□□□ 0.89
Chd1lQ9CXF7 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.58■□□□□ 0.89
Chd1lQ9CXF7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd1lQ9CXF7 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.58■□□□□ 0.89
Chd1lQ9CXF7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chd1lQ9CXF7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Chd1lQ9CXF7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd1lQ9CXF7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd1lQ9CXF7 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd1lQ9CXF7 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd1lQ9CXF7 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.57■□□□□ 0.88
Chd1lQ9CXF7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd1lQ9CXF7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Chd1lQ9CXF7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd1lQ9CXF7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1lQ9CXF7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1lQ9CXF7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1lQ9CXF7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1lQ9CXF7 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1lQ9CXF7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1lQ9CXF7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1lQ9CXF7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1lQ9CXF7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1lQ9CXF7 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chd1lQ9CXF7 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Chd1lQ9CXF7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1lQ9CXF7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1lQ9CXF7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1lQ9CXF7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1lQ9CXF7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Chd1lQ9CXF7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1lQ9CXF7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1lQ9CXF7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1lQ9CXF7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1lQ9CXF7 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1lQ9CXF7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd1lQ9CXF7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.55■□□□□ 0.88
Chd1lQ9CXF7 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.54■□□□□ 0.88
Chd1lQ9CXF7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd1lQ9CXF7 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms