Protein–RNA interactions for Protein: Q9CXE0

Prdm5, PR domain zinc finger protein 5, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm5Q9CXE0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm5Q9CXE0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm5Q9CXE0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Prdm5Q9CXE0 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm5Q9CXE0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm5Q9CXE0 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm5Q9CXE0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Prdm5Q9CXE0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm5Q9CXE0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm5Q9CXE0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm5Q9CXE0 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.28■□□□□ 0.36
Prdm5Q9CXE0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm5Q9CXE0 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm5Q9CXE0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm5Q9CXE0 Gm29257-201ENSMUST00000186115 639 ntBASIC17.28■□□□□ 0.36
Prdm5Q9CXE0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.28■□□□□ 0.36
Prdm5Q9CXE0 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.28■□□□□ 0.36
Prdm5Q9CXE0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Prdm5Q9CXE0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Prdm5Q9CXE0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm5Q9CXE0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm5Q9CXE0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm5Q9CXE0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm5Q9CXE0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm5Q9CXE0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm5Q9CXE0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Prdm5Q9CXE0 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.27■□□□□ 0.36
Prdm5Q9CXE0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.27■□□□□ 0.36
Prdm5Q9CXE0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.27■□□□□ 0.36
Prdm5Q9CXE0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Prdm5Q9CXE0 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.27■□□□□ 0.35
Prdm5Q9CXE0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prdm5Q9CXE0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Prdm5Q9CXE0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm5Q9CXE0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm5Q9CXE0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm5Q9CXE0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm5Q9CXE0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.26■□□□□ 0.35
Prdm5Q9CXE0 Gm6420-201ENSMUST00000193885 723 ntBASIC17.26■□□□□ 0.35
Prdm5Q9CXE0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Prdm5Q9CXE0 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm5Q9CXE0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm5Q9CXE0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Prdm5Q9CXE0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm5Q9CXE0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm5Q9CXE0 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm5Q9CXE0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Prdm5Q9CXE0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC17.25■□□□□ 0.35
Prdm5Q9CXE0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Prdm5Q9CXE0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.25■□□□□ 0.35
Prdm5Q9CXE0 Gm27405-201ENSMUST00000184201 112 ntBASIC17.25■□□□□ 0.35
Prdm5Q9CXE0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm5Q9CXE0 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm5Q9CXE0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Prdm5Q9CXE0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm5Q9CXE0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm5Q9CXE0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Prdm5Q9CXE0 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Prdm5Q9CXE0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm5Q9CXE0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm5Q9CXE0 Nespas-201ENSMUST00000143738 1083 ntBASIC17.24■□□□□ 0.35
Prdm5Q9CXE0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.24■□□□□ 0.35
Prdm5Q9CXE0 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm5Q9CXE0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm5Q9CXE0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm5Q9CXE0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm5Q9CXE0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Prdm5Q9CXE0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Prdm5Q9CXE0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Prdm5Q9CXE0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prdm5Q9CXE0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prdm5Q9CXE0 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prdm5Q9CXE0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prdm5Q9CXE0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Prdm5Q9CXE0 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.23■□□□□ 0.35
Prdm5Q9CXE0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.23■□□□□ 0.35
Prdm5Q9CXE0 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prdm5Q9CXE0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Prdm5Q9CXE0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prdm5Q9CXE0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prdm5Q9CXE0 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prdm5Q9CXE0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prdm5Q9CXE0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prdm5Q9CXE0 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Prdm5Q9CXE0 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prdm5Q9CXE0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Prdm5Q9CXE0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prdm5Q9CXE0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
Prdm5Q9CXE0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.22■□□□□ 0.35
Prdm5Q9CXE0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prdm5Q9CXE0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Prdm5Q9CXE0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.22■□□□□ 0.35
Prdm5Q9CXE0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prdm5Q9CXE0 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prdm5Q9CXE0 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.22■□□□□ 0.35
Prdm5Q9CXE0 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prdm5Q9CXE0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prdm5Q9CXE0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prdm5Q9CXE0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Prdm5Q9CXE0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms