Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx47Q9CWX9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx47Q9CWX9 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx47Q9CWX9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.77■□□□□ 0.6
Ddx47Q9CWX9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx47Q9CWX9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx47Q9CWX9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx47Q9CWX9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx47Q9CWX9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx47Q9CWX9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.77■□□□□ 0.59
Ddx47Q9CWX9 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ddx47Q9CWX9 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ddx47Q9CWX9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx47Q9CWX9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.76■□□□□ 0.59
Ddx47Q9CWX9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx47Q9CWX9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx47Q9CWX9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx47Q9CWX9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Ddx47Q9CWX9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx47Q9CWX9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.76■□□□□ 0.59
Ddx47Q9CWX9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ddx47Q9CWX9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx47Q9CWX9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx47Q9CWX9 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ddx47Q9CWX9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx47Q9CWX9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ddx47Q9CWX9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx47Q9CWX9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx47Q9CWX9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx47Q9CWX9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx47Q9CWX9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx47Q9CWX9 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx47Q9CWX9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx47Q9CWX9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx47Q9CWX9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.75■□□□□ 0.59
Ddx47Q9CWX9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx47Q9CWX9 Gm14117-201ENSMUST00000122417 843 ntBASIC18.75■□□□□ 0.59
Ddx47Q9CWX9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.75■□□□□ 0.59
Ddx47Q9CWX9 Gm8969-201ENSMUST00000199694 526 ntBASIC18.75■□□□□ 0.59
Ddx47Q9CWX9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx47Q9CWX9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx47Q9CWX9 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx47Q9CWX9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.74■□□□□ 0.59
Ddx47Q9CWX9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Ddx47Q9CWX9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx47Q9CWX9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx47Q9CWX9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx47Q9CWX9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx47Q9CWX9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx47Q9CWX9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx47Q9CWX9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx47Q9CWX9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx47Q9CWX9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx47Q9CWX9 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx47Q9CWX9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx47Q9CWX9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx47Q9CWX9 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx47Q9CWX9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx47Q9CWX9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx47Q9CWX9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx47Q9CWX9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx47Q9CWX9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx47Q9CWX9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx47Q9CWX9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx47Q9CWX9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx47Q9CWX9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx47Q9CWX9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ddx47Q9CWX9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Ddx47Q9CWX9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Ddx47Q9CWX9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx47Q9CWX9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ddx47Q9CWX9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx47Q9CWX9 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.72■□□□□ 0.59
Ddx47Q9CWX9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx47Q9CWX9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx47Q9CWX9 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx47Q9CWX9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ddx47Q9CWX9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx47Q9CWX9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Ddx47Q9CWX9 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Ddx47Q9CWX9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ddx47Q9CWX9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Ddx47Q9CWX9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.72■□□□□ 0.59
Ddx47Q9CWX9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ddx47Q9CWX9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms