Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Q9CR55 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q9CR55 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Q9CR55 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.92■□□□□ 0.3
Q9CR55 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Q9CR55 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.92■□□□□ 0.3
Q9CR55 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.92■□□□□ 0.3
Q9CR55 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Q9CR55 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q9CR55 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Q9CR55 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Q9CR55 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q9CR55 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q9CR55 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q9CR55 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q9CR55 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Q9CR55 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q9CR55 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Q9CR55 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.91■□□□□ 0.3
Q9CR55 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.91■□□□□ 0.3
Q9CR55 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Q9CR55 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q9CR55 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Q9CR55 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Q9CR55 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q9CR55 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q9CR55 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Q9CR55 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q9CR55 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q9CR55 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q9CR55 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q9CR55 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q9CR55 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Q9CR55 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q9CR55 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Q9CR55 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q9CR55 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Q9CR55 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q9CR55 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Q9CR55 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.9■□□□□ 0.3
Q9CR55 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Q9CR55 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q9CR55 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q9CR55 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q9CR55 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q9CR55 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Q9CR55 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Q9CR55 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.89■□□□□ 0.3
Q9CR55 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Q9CR55 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Q9CR55 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q9CR55 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Q9CR55 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q9CR55 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Q9CR55 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q9CR55 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Q9CR55 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q9CR55 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q9CR55 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q9CR55 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Q9CR55 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.89■□□□□ 0.29
Q9CR55 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q9CR55 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q9CR55 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Q9CR55 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.88■□□□□ 0.29
Q9CR55 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q9CR55 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q9CR55 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q9CR55 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q9CR55 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q9CR55 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q9CR55 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q9CR55 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q9CR55 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.88■□□□□ 0.29
Q9CR55 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.88■□□□□ 0.29
Q9CR55 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q9CR55 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.88■□□□□ 0.29
Q9CR55 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q9CR55 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Q9CR55 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q9CR55 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q9CR55 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Q9CR55 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q9CR55 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q9CR55 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q9CR55 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Q9CR55 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q9CR55 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q9CR55 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Q9CR55 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Q9CR55 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Q9CR55 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q9CR55 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Q9CR55 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q9CR55 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Q9CR55 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q9CR55 Gm40881-201ENSMUST00000223397 166 ntBASIC16.87■□□□□ 0.29
Q9CR55 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Q9CR55 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Q9CR55 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms