Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Retreg3Q9CQV4 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg3Q9CQV4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retreg3Q9CQV4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg3Q9CQV4 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg3Q9CQV4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg3Q9CQV4 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg3Q9CQV4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg3Q9CQV4 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg3Q9CQV4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Retreg3Q9CQV4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg3Q9CQV4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg3Q9CQV4 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg3Q9CQV4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retreg3Q9CQV4 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.34■□□□□ 0.53
Retreg3Q9CQV4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Retreg3Q9CQV4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retreg3Q9CQV4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retreg3Q9CQV4 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.33■□□□□ 0.53
Retreg3Q9CQV4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retreg3Q9CQV4 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retreg3Q9CQV4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retreg3Q9CQV4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retreg3Q9CQV4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Retreg3Q9CQV4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retreg3Q9CQV4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg3Q9CQV4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Retreg3Q9CQV4 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg3Q9CQV4 Gm22325-201ENSMUST00000158904 308 ntBASIC18.33■□□□□ 0.52
Retreg3Q9CQV4 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg3Q9CQV4 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.33■□□□□ 0.52
Retreg3Q9CQV4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg3Q9CQV4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg3Q9CQV4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg3Q9CQV4 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.33■□□□□ 0.52
Retreg3Q9CQV4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.33■□□□□ 0.52
Retreg3Q9CQV4 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Retreg3Q9CQV4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg3Q9CQV4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Retreg3Q9CQV4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Retreg3Q9CQV4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.32■□□□□ 0.52
Retreg3Q9CQV4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg3Q9CQV4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.32■□□□□ 0.52
Retreg3Q9CQV4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg3Q9CQV4 Fst-202ENSMUST00000223640 2612 ntBASIC18.32■□□□□ 0.52
Retreg3Q9CQV4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg3Q9CQV4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg3Q9CQV4 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg3Q9CQV4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Retreg3Q9CQV4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg3Q9CQV4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.31■□□□□ 0.52
Retreg3Q9CQV4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg3Q9CQV4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg3Q9CQV4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Retreg3Q9CQV4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.31■□□□□ 0.52
Retreg3Q9CQV4 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Retreg3Q9CQV4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.31■□□□□ 0.52
Retreg3Q9CQV4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Retreg3Q9CQV4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg3Q9CQV4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg3Q9CQV4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg3Q9CQV4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.31■□□□□ 0.52
Retreg3Q9CQV4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg3Q9CQV4 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg3Q9CQV4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg3Q9CQV4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg3Q9CQV4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Retreg3Q9CQV4 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg3Q9CQV4 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg3Q9CQV4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Retreg3Q9CQV4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Retreg3Q9CQV4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Retreg3Q9CQV4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg3Q9CQV4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.3■□□□□ 0.52
Retreg3Q9CQV4 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg3Q9CQV4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg3Q9CQV4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Retreg3Q9CQV4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.3■□□□□ 0.52
Retreg3Q9CQV4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.29■□□□□ 0.52
Retreg3Q9CQV4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Retreg3Q9CQV4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg3Q9CQV4 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg3Q9CQV4 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Retreg3Q9CQV4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.29■□□□□ 0.52
Retreg3Q9CQV4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg3Q9CQV4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Retreg3Q9CQV4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg3Q9CQV4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg3Q9CQV4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Retreg3Q9CQV4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg3Q9CQV4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Retreg3Q9CQV4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg3Q9CQV4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg3Q9CQV4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg3Q9CQV4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg3Q9CQV4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg3Q9CQV4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.28■□□□□ 0.52
Retreg3Q9CQV4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.28■□□□□ 0.52
Retreg3Q9CQV4 Gm5408-201ENSMUST00000197998 747 ntBASIC18.28■□□□□ 0.52
Retreg3Q9CQV4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms