Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rpa3Q9CQ71 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpa3Q9CQ71 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rpa3Q9CQ71 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rpa3Q9CQ71 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpa3Q9CQ71 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpa3Q9CQ71 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rpa3Q9CQ71 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rpa3Q9CQ71 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpa3Q9CQ71 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Rpa3Q9CQ71 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpa3Q9CQ71 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.28■□□□□ 0.68
Rpa3Q9CQ71 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpa3Q9CQ71 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpa3Q9CQ71 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpa3Q9CQ71 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Rpa3Q9CQ71 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Rpa3Q9CQ71 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rpa3Q9CQ71 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpa3Q9CQ71 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpa3Q9CQ71 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpa3Q9CQ71 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpa3Q9CQ71 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Rpa3Q9CQ71 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rpa3Q9CQ71 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.26■□□□□ 0.67
Rpa3Q9CQ71 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rpa3Q9CQ71 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.26■□□□□ 0.67
Rpa3Q9CQ71 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpa3Q9CQ71 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rpa3Q9CQ71 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rpa3Q9CQ71 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpa3Q9CQ71 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rpa3Q9CQ71 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
Rpa3Q9CQ71 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
Rpa3Q9CQ71 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rpa3Q9CQ71 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpa3Q9CQ71 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpa3Q9CQ71 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpa3Q9CQ71 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rpa3Q9CQ71 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Rpa3Q9CQ71 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.25■□□□□ 0.67
Rpa3Q9CQ71 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpa3Q9CQ71 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpa3Q9CQ71 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpa3Q9CQ71 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpa3Q9CQ71 Gm22325-201ENSMUST00000158904 308 ntBASIC19.25■□□□□ 0.67
Rpa3Q9CQ71 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.25■□□□□ 0.67
Rpa3Q9CQ71 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rpa3Q9CQ71 Gm10602-201ENSMUST00000098239 609 ntBASIC19.25■□□□□ 0.67
Rpa3Q9CQ71 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.25■□□□□ 0.67
Rpa3Q9CQ71 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpa3Q9CQ71 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpa3Q9CQ71 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpa3Q9CQ71 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpa3Q9CQ71 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpa3Q9CQ71 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpa3Q9CQ71 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpa3Q9CQ71 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rpa3Q9CQ71 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Rpa3Q9CQ71 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.25■□□□□ 0.67
Rpa3Q9CQ71 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpa3Q9CQ71 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rpa3Q9CQ71 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rpa3Q9CQ71 Gm13148-201ENSMUST00000118892 745 ntBASIC19.24■□□□□ 0.67
Rpa3Q9CQ71 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpa3Q9CQ71 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rpa3Q9CQ71 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpa3Q9CQ71 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rpa3Q9CQ71 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rpa3Q9CQ71 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpa3Q9CQ71 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rpa3Q9CQ71 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpa3Q9CQ71 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Rpa3Q9CQ71 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpa3Q9CQ71 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Rpa3Q9CQ71 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpa3Q9CQ71 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rpa3Q9CQ71 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpa3Q9CQ71 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.23■□□□□ 0.67
Rpa3Q9CQ71 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Rpa3Q9CQ71 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.23■□□□□ 0.67
Rpa3Q9CQ71 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.23■□□□□ 0.67
Rpa3Q9CQ71 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rpa3Q9CQ71 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rpa3Q9CQ71 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rpa3Q9CQ71 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpa3Q9CQ71 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpa3Q9CQ71 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.23■□□□□ 0.67
Rpa3Q9CQ71 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpa3Q9CQ71 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rpa3Q9CQ71 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Rpa3Q9CQ71 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpa3Q9CQ71 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpa3Q9CQ71 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpa3Q9CQ71 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpa3Q9CQ71 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpa3Q9CQ71 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rpa3Q9CQ71 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Rpa3Q9CQ71 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpa3Q9CQ71 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms