Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubqln4Q99NB8 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubqln4Q99NB8 Gm7290-201ENSMUST00000104990 617 ntBASIC16.59■□□□□ 0.25
Ubqln4Q99NB8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubqln4Q99NB8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.59■□□□□ 0.25
Ubqln4Q99NB8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubqln4Q99NB8 Gm12918-201ENSMUST00000120234 636 ntBASIC16.59■□□□□ 0.25
Ubqln4Q99NB8 Gm15710-201ENSMUST00000121821 636 ntBASIC16.59■□□□□ 0.25
Ubqln4Q99NB8 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubqln4Q99NB8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.59■□□□□ 0.25
Ubqln4Q99NB8 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubqln4Q99NB8 Gm27405-201ENSMUST00000184201 112 ntBASIC16.59■□□□□ 0.25
Ubqln4Q99NB8 Gm5075-201ENSMUST00000196916 622 ntBASIC16.59■□□□□ 0.25
Ubqln4Q99NB8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubqln4Q99NB8 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.59■□□□□ 0.25
Ubqln4Q99NB8 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.59■□□□□ 0.25
Ubqln4Q99NB8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubqln4Q99NB8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ubqln4Q99NB8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ubqln4Q99NB8 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Ubqln4Q99NB8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ubqln4Q99NB8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.58■□□□□ 0.24
Ubqln4Q99NB8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubqln4Q99NB8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubqln4Q99NB8 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ubqln4Q99NB8 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.58■□□□□ 0.24
Ubqln4Q99NB8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ubqln4Q99NB8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ubqln4Q99NB8 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Ubqln4Q99NB8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubqln4Q99NB8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubqln4Q99NB8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ubqln4Q99NB8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubqln4Q99NB8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubqln4Q99NB8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ubqln4Q99NB8 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubqln4Q99NB8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubqln4Q99NB8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubqln4Q99NB8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Ubqln4Q99NB8 Gm22325-201ENSMUST00000158904 308 ntBASIC16.57■□□□□ 0.24
Ubqln4Q99NB8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.57■□□□□ 0.24
Ubqln4Q99NB8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.57■□□□□ 0.24
Ubqln4Q99NB8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Ubqln4Q99NB8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ubqln4Q99NB8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubqln4Q99NB8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubqln4Q99NB8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubqln4Q99NB8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubqln4Q99NB8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.56■□□□□ 0.24
Ubqln4Q99NB8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubqln4Q99NB8 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.56■□□□□ 0.24
Ubqln4Q99NB8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ubqln4Q99NB8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubqln4Q99NB8 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubqln4Q99NB8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubqln4Q99NB8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ubqln4Q99NB8 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Ubqln4Q99NB8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Ubqln4Q99NB8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubqln4Q99NB8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubqln4Q99NB8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubqln4Q99NB8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ubqln4Q99NB8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.55■□□□□ 0.24
Ubqln4Q99NB8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubqln4Q99NB8 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ubqln4Q99NB8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubqln4Q99NB8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ubqln4Q99NB8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubqln4Q99NB8 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubqln4Q99NB8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Ubqln4Q99NB8 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.54■□□□□ 0.24
Ubqln4Q99NB8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Ubqln4Q99NB8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubqln4Q99NB8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ubqln4Q99NB8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.54■□□□□ 0.24
Ubqln4Q99NB8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Ubqln4Q99NB8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.54■□□□□ 0.24
Ubqln4Q99NB8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ubqln4Q99NB8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubqln4Q99NB8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ubqln4Q99NB8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubqln4Q99NB8 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ubqln4Q99NB8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Ubqln4Q99NB8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubqln4Q99NB8 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.53■□□□□ 0.24
Ubqln4Q99NB8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Ubqln4Q99NB8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Ubqln4Q99NB8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.53■□□□□ 0.24
Ubqln4Q99NB8 Gm7291-201ENSMUST00000199147 382 ntBASIC16.53■□□□□ 0.24
Ubqln4Q99NB8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ubqln4Q99NB8 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ubqln4Q99NB8 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ubqln4Q99NB8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubqln4Q99NB8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.52■□□□□ 0.24
Ubqln4Q99NB8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ubqln4Q99NB8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubqln4Q99NB8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubqln4Q99NB8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ubqln4Q99NB8 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.52■□□□□ 0.24
Ubqln4Q99NB8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms