Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
Clp1Q99LI9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clp1Q99LI9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clp1Q99LI9 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Clp1Q99LI9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clp1Q99LI9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clp1Q99LI9 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.35■□□□□ 0.69
Clp1Q99LI9 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clp1Q99LI9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.35■□□□□ 0.69
Clp1Q99LI9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clp1Q99LI9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clp1Q99LI9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clp1Q99LI9 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clp1Q99LI9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Clp1Q99LI9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.35■□□□□ 0.69
Clp1Q99LI9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clp1Q99LI9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Clp1Q99LI9 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.34■□□□□ 0.69
Clp1Q99LI9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.34■□□□□ 0.69
Clp1Q99LI9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clp1Q99LI9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Clp1Q99LI9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clp1Q99LI9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clp1Q99LI9 Gm7367-201ENSMUST00000057611 492 ntBASIC19.34■□□□□ 0.69
Clp1Q99LI9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clp1Q99LI9 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clp1Q99LI9 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.33■□□□□ 0.68
Clp1Q99LI9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clp1Q99LI9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clp1Q99LI9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clp1Q99LI9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.33■□□□□ 0.68
Clp1Q99LI9 Gm10654-201ENSMUST00000098653 1633 ntBASIC19.33■□□□□ 0.68
Clp1Q99LI9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clp1Q99LI9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clp1Q99LI9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clp1Q99LI9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clp1Q99LI9 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Clp1Q99LI9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clp1Q99LI9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clp1Q99LI9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clp1Q99LI9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clp1Q99LI9 Golph3-202ENSMUST00000226517 2359 ntBASIC19.31■□□□□ 0.68
Clp1Q99LI9 Gm44544-201ENSMUST00000207052 1844 ntBASIC19.31■□□□□ 0.68
Clp1Q99LI9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Clp1Q99LI9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.31■□□□□ 0.68
Clp1Q99LI9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clp1Q99LI9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.31■□□□□ 0.68
Clp1Q99LI9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.31■□□□□ 0.68
Clp1Q99LI9 Gm18959-201ENSMUST00000208954 655 ntBASIC19.31■□□□□ 0.68
Clp1Q99LI9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clp1Q99LI9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Clp1Q99LI9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clp1Q99LI9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Clp1Q99LI9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clp1Q99LI9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Clp1Q99LI9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clp1Q99LI9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clp1Q99LI9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clp1Q99LI9 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clp1Q99LI9 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clp1Q99LI9 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clp1Q99LI9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clp1Q99LI9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Clp1Q99LI9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.3■□□□□ 0.68
Clp1Q99LI9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clp1Q99LI9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clp1Q99LI9 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.29■□□□□ 0.68
Clp1Q99LI9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clp1Q99LI9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clp1Q99LI9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Clp1Q99LI9 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clp1Q99LI9 Gm18032-201ENSMUST00000222541 538 ntBASIC19.29■□□□□ 0.68
Clp1Q99LI9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clp1Q99LI9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clp1Q99LI9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clp1Q99LI9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clp1Q99LI9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clp1Q99LI9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Clp1Q99LI9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clp1Q99LI9 Gm23634-201ENSMUST00000175071 91 ntBASIC19.28■□□□□ 0.68
Clp1Q99LI9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.28■□□□□ 0.68
Clp1Q99LI9 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clp1Q99LI9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clp1Q99LI9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clp1Q99LI9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.28■□□□□ 0.68
Clp1Q99LI9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clp1Q99LI9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clp1Q99LI9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clp1Q99LI9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clp1Q99LI9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clp1Q99LI9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clp1Q99LI9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Clp1Q99LI9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clp1Q99LI9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clp1Q99LI9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clp1Q99LI9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clp1Q99LI9 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Clp1Q99LI9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clp1Q99LI9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Clp1Q99LI9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms