Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cstf3Q99LI7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cstf3Q99LI7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cstf3Q99LI7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cstf3Q99LI7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cstf3Q99LI7 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cstf3Q99LI7 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Cstf3Q99LI7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cstf3Q99LI7 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cstf3Q99LI7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cstf3Q99LI7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cstf3Q99LI7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Cstf3Q99LI7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cstf3Q99LI7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cstf3Q99LI7 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.66■□□□□ 0.42
Cstf3Q99LI7 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cstf3Q99LI7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cstf3Q99LI7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cstf3Q99LI7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cstf3Q99LI7 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cstf3Q99LI7 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.65■□□□□ 0.42
Cstf3Q99LI7 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cstf3Q99LI7 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cstf3Q99LI7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cstf3Q99LI7 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cstf3Q99LI7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.65■□□□□ 0.42
Cstf3Q99LI7 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.65■□□□□ 0.42
Cstf3Q99LI7 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.65■□□□□ 0.42
Cstf3Q99LI7 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.65■□□□□ 0.42
Cstf3Q99LI7 Gm42778-201ENSMUST00000199644 553 ntBASIC17.65■□□□□ 0.42
Cstf3Q99LI7 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.65■□□□□ 0.42
Cstf3Q99LI7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cstf3Q99LI7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.65■□□□□ 0.42
Cstf3Q99LI7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cstf3Q99LI7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cstf3Q99LI7 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cstf3Q99LI7 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cstf3Q99LI7 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cstf3Q99LI7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cstf3Q99LI7 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Cstf3Q99LI7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cstf3Q99LI7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cstf3Q99LI7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cstf3Q99LI7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cstf3Q99LI7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cstf3Q99LI7 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cstf3Q99LI7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Cstf3Q99LI7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cstf3Q99LI7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cstf3Q99LI7 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.64■□□□□ 0.41
Cstf3Q99LI7 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cstf3Q99LI7 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.64■□□□□ 0.41
Cstf3Q99LI7 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.64■□□□□ 0.41
Cstf3Q99LI7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cstf3Q99LI7 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf3Q99LI7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf3Q99LI7 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf3Q99LI7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf3Q99LI7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.63■□□□□ 0.41
Cstf3Q99LI7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf3Q99LI7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.63■□□□□ 0.41
Cstf3Q99LI7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf3Q99LI7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf3Q99LI7 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf3Q99LI7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf3Q99LI7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cstf3Q99LI7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.63■□□□□ 0.41
Cstf3Q99LI7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf3Q99LI7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf3Q99LI7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cstf3Q99LI7 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf3Q99LI7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.62■□□□□ 0.41
Cstf3Q99LI7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.62■□□□□ 0.41
Cstf3Q99LI7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf3Q99LI7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf3Q99LI7 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Cstf3Q99LI7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf3Q99LI7 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf3Q99LI7 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf3Q99LI7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cstf3Q99LI7 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cstf3Q99LI7 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cstf3Q99LI7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cstf3Q99LI7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cstf3Q99LI7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cstf3Q99LI7 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.61■□□□□ 0.41
Cstf3Q99LI7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cstf3Q99LI7 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cstf3Q99LI7 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.61■□□□□ 0.41
Cstf3Q99LI7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cstf3Q99LI7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cstf3Q99LI7 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cstf3Q99LI7 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cstf3Q99LI7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cstf3Q99LI7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cstf3Q99LI7 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cstf3Q99LI7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.6■□□□□ 0.41
Cstf3Q99LI7 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.6■□□□□ 0.41
Cstf3Q99LI7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cstf3Q99LI7 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms