Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd3Q99LE3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd3Q99LE3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Lysmd3Q99LE3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd3Q99LE3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd3Q99LE3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Lysmd3Q99LE3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lysmd3Q99LE3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Lysmd3Q99LE3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lysmd3Q99LE3 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.92■□□□□ 0.62
Lysmd3Q99LE3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.92■□□□□ 0.62
Lysmd3Q99LE3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lysmd3Q99LE3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lysmd3Q99LE3 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Lysmd3Q99LE3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lysmd3Q99LE3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lysmd3Q99LE3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.92■□□□□ 0.62
Lysmd3Q99LE3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.92■□□□□ 0.62
Lysmd3Q99LE3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lysmd3Q99LE3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Lysmd3Q99LE3 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lysmd3Q99LE3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lysmd3Q99LE3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lysmd3Q99LE3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lysmd3Q99LE3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Lysmd3Q99LE3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lysmd3Q99LE3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lysmd3Q99LE3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Lysmd3Q99LE3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lysmd3Q99LE3 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Lysmd3Q99LE3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.91■□□□□ 0.62
Lysmd3Q99LE3 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lysmd3Q99LE3 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lysmd3Q99LE3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lysmd3Q99LE3 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Lysmd3Q99LE3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC18.9■□□□□ 0.62
Lysmd3Q99LE3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lysmd3Q99LE3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Lysmd3Q99LE3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Lysmd3Q99LE3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lysmd3Q99LE3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lysmd3Q99LE3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lysmd3Q99LE3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lysmd3Q99LE3 Flg-201ENSMUST00000050758 1488 ntBASIC18.9■□□□□ 0.62
Lysmd3Q99LE3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Lysmd3Q99LE3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Lysmd3Q99LE3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd3Q99LE3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.89■□□□□ 0.61
Lysmd3Q99LE3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.89■□□□□ 0.61
Lysmd3Q99LE3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd3Q99LE3 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd3Q99LE3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd3Q99LE3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd3Q99LE3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd3Q99LE3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd3Q99LE3 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lysmd3Q99LE3 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.89■□□□□ 0.61
Lysmd3Q99LE3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.89■□□□□ 0.61
Lysmd3Q99LE3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd3Q99LE3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd3Q99LE3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd3Q99LE3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.88■□□□□ 0.61
Lysmd3Q99LE3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd3Q99LE3 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd3Q99LE3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd3Q99LE3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
Lysmd3Q99LE3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd3Q99LE3 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd3Q99LE3 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd3Q99LE3 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lysmd3Q99LE3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Lysmd3Q99LE3 Gm11927-201ENSMUST00000118472 759 ntBASIC18.87■□□□□ 0.61
Lysmd3Q99LE3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lysmd3Q99LE3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lysmd3Q99LE3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lysmd3Q99LE3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lysmd3Q99LE3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lysmd3Q99LE3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Lysmd3Q99LE3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd3Q99LE3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.86■□□□□ 0.61
Lysmd3Q99LE3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd3Q99LE3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.86■□□□□ 0.61
Lysmd3Q99LE3 Gm5643-201ENSMUST00000117081 966 ntBASIC18.86■□□□□ 0.61
Lysmd3Q99LE3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Lysmd3Q99LE3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.86■□□□□ 0.61
Lysmd3Q99LE3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd3Q99LE3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd3Q99LE3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd3Q99LE3 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd3Q99LE3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd3Q99LE3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lysmd3Q99LE3 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.85■□□□□ 0.61
Lysmd3Q99LE3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd3Q99LE3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd3Q99LE3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd3Q99LE3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd3Q99LE3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd3Q99LE3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd3Q99LE3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lysmd3Q99LE3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms