Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Usp11Q99K46 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp11Q99K46 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp11Q99K46 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp11Q99K46 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Usp11Q99K46 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.2■□□□□ 0.66
Usp11Q99K46 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp11Q99K46 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Usp11Q99K46 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp11Q99K46 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp11Q99K46 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp11Q99K46 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp11Q99K46 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp11Q99K46 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp11Q99K46 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.19■□□□□ 0.66
Usp11Q99K46 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.19■□□□□ 0.66
Usp11Q99K46 Gm13534-201ENSMUST00000121169 513 ntBASIC19.19■□□□□ 0.66
Usp11Q99K46 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Usp11Q99K46 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.19■□□□□ 0.66
Usp11Q99K46 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.19■□□□□ 0.66
Usp11Q99K46 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Usp11Q99K46 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.19■□□□□ 0.66
Usp11Q99K46 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Usp11Q99K46 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp11Q99K46 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp11Q99K46 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp11Q99K46 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Usp11Q99K46 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.19■□□□□ 0.66
Usp11Q99K46 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp11Q99K46 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp11Q99K46 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Usp11Q99K46 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Usp11Q99K46 Gm7291-201ENSMUST00000199147 382 ntBASIC19.18■□□□□ 0.66
Usp11Q99K46 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.18■□□□□ 0.66
Usp11Q99K46 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp11Q99K46 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Usp11Q99K46 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Usp11Q99K46 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp11Q99K46 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp11Q99K46 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.17■□□□□ 0.66
Usp11Q99K46 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp11Q99K46 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp11Q99K46 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp11Q99K46 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp11Q99K46 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp11Q99K46 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Usp11Q99K46 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.17■□□□□ 0.66
Usp11Q99K46 Gm7514-201ENSMUST00000209475 934 ntBASIC19.17■□□□□ 0.66
Usp11Q99K46 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp11Q99K46 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp11Q99K46 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp11Q99K46 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.17■□□□□ 0.66
Usp11Q99K46 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp11Q99K46 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Usp11Q99K46 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Usp11Q99K46 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp11Q99K46 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp11Q99K46 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Usp11Q99K46 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Usp11Q99K46 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Usp11Q99K46 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp11Q99K46 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp11Q99K46 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp11Q99K46 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Usp11Q99K46 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp11Q99K46 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp11Q99K46 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp11Q99K46 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp11Q99K46 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Usp11Q99K46 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Usp11Q99K46 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp11Q99K46 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp11Q99K46 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp11Q99K46 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp11Q99K46 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp11Q99K46 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp11Q99K46 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.15■□□□□ 0.66
Usp11Q99K46 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.15■□□□□ 0.66
Usp11Q99K46 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.15■□□□□ 0.66
Usp11Q99K46 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Usp11Q99K46 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp11Q99K46 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp11Q99K46 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.15■□□□□ 0.66
Usp11Q99K46 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp11Q99K46 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Usp11Q99K46 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Usp11Q99K46 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Usp11Q99K46 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp11Q99K46 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.14■□□□□ 0.65
Usp11Q99K46 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp11Q99K46 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Usp11Q99K46 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.14■□□□□ 0.65
Usp11Q99K46 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.14■□□□□ 0.65
Usp11Q99K46 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.14■□□□□ 0.65
Usp11Q99K46 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Usp11Q99K46 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp11Q99K46 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp11Q99K46 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.14■□□□□ 0.65
Usp11Q99K46 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Usp11Q99K46 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms