Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.08■□□□□ 0.97
Rfc4Q99J62 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rfc4Q99J62 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rfc4Q99J62 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfc4Q99J62 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfc4Q99J62 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfc4Q99J62 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfc4Q99J62 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.07■□□□□ 0.96
Rfc4Q99J62 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.07■□□□□ 0.96
Rfc4Q99J62 Gm42545-201ENSMUST00000202755 922 ntBASIC21.07■□□□□ 0.96
Rfc4Q99J62 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rfc4Q99J62 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rfc4Q99J62 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfc4Q99J62 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfc4Q99J62 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.07■□□□□ 0.96
Rfc4Q99J62 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfc4Q99J62 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rfc4Q99J62 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rfc4Q99J62 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Rfc4Q99J62 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Rfc4Q99J62 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rfc4Q99J62 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rfc4Q99J62 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rfc4Q99J62 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC21.06■□□□□ 0.96
Rfc4Q99J62 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.06■□□□□ 0.96
Rfc4Q99J62 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC21.06■□□□□ 0.96
Rfc4Q99J62 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rfc4Q99J62 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rfc4Q99J62 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Rfc4Q99J62 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rfc4Q99J62 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rfc4Q99J62 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Rfc4Q99J62 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rfc4Q99J62 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC21.05■□□□□ 0.96
Rfc4Q99J62 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfc4Q99J62 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Rfc4Q99J62 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfc4Q99J62 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Rfc4Q99J62 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rfc4Q99J62 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfc4Q99J62 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfc4Q99J62 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Rfc4Q99J62 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Rfc4Q99J62 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfc4Q99J62 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.04■□□□□ 0.96
Rfc4Q99J62 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfc4Q99J62 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.04■□□□□ 0.96
Rfc4Q99J62 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfc4Q99J62 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rfc4Q99J62 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Rfc4Q99J62 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfc4Q99J62 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfc4Q99J62 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rfc4Q99J62 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rfc4Q99J62 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfc4Q99J62 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.03■□□□□ 0.96
Rfc4Q99J62 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfc4Q99J62 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfc4Q99J62 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Rfc4Q99J62 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.03■□□□□ 0.96
Rfc4Q99J62 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfc4Q99J62 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.03■□□□□ 0.96
Rfc4Q99J62 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfc4Q99J62 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfc4Q99J62 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rfc4Q99J62 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rfc4Q99J62 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfc4Q99J62 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfc4Q99J62 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfc4Q99J62 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfc4Q99J62 Gm13559-201ENSMUST00000120476 863 ntBASIC21.02■□□□□ 0.96
Rfc4Q99J62 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rfc4Q99J62 Odf3b-204ENSMUST00000227834 930 ntBASIC21.02■□□□□ 0.96
Rfc4Q99J62 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfc4Q99J62 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfc4Q99J62 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfc4Q99J62 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rfc4Q99J62 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rfc4Q99J62 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfc4Q99J62 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfc4Q99J62 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfc4Q99J62 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.01■□□□□ 0.95
Rfc4Q99J62 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.01■□□□□ 0.95
Rfc4Q99J62 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfc4Q99J62 Gm37292-201ENSMUST00000192062 758 ntBASIC21.01■□□□□ 0.95
Rfc4Q99J62 Gm38285-201ENSMUST00000192928 922 ntBASIC21.01■□□□□ 0.95
Rfc4Q99J62 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rfc4Q99J62 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rfc4Q99J62 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfc4Q99J62 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rfc4Q99J62 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfc4Q99J62 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rfc4Q99J62 Timm23-208ENSMUST00000226683 750 ntBASIC21■□□□□ 0.95
Rfc4Q99J62 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21■□□□□ 0.95
Rfc4Q99J62 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21■□□□□ 0.95
Rfc4Q99J62 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC21■□□□□ 0.95
Rfc4Q99J62 Iqck-206ENSMUST00000208658 2891 ntBASIC21■□□□□ 0.95
Rfc4Q99J62 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rfc4Q99J62 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC21■□□□□ 0.95
Rfc4Q99J62 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms