Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp1aQ921W0 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Chmp1aQ921W0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Chmp1aQ921W0 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp1aQ921W0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.1■□□□□ 0.17
Chmp1aQ921W0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Chmp1aQ921W0 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp1aQ921W0 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Chmp1aQ921W0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.1■□□□□ 0.17
Chmp1aQ921W0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp1aQ921W0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp1aQ921W0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp1aQ921W0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.1■□□□□ 0.17
Chmp1aQ921W0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp1aQ921W0 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.1■□□□□ 0.17
Chmp1aQ921W0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp1aQ921W0 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.1■□□□□ 0.17
Chmp1aQ921W0 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp1aQ921W0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp1aQ921W0 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Chmp1aQ921W0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp1aQ921W0 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Chmp1aQ921W0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Chmp1aQ921W0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Chmp1aQ921W0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp1aQ921W0 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC16.09■□□□□ 0.17
Chmp1aQ921W0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp1aQ921W0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp1aQ921W0 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp1aQ921W0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Chmp1aQ921W0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp1aQ921W0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Chmp1aQ921W0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp1aQ921W0 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp1aQ921W0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp1aQ921W0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.09■□□□□ 0.17
Chmp1aQ921W0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp1aQ921W0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp1aQ921W0 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp1aQ921W0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp1aQ921W0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp1aQ921W0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp1aQ921W0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp1aQ921W0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp1aQ921W0 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp1aQ921W0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp1aQ921W0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp1aQ921W0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp1aQ921W0 Gm7860-201ENSMUST00000121190 879 ntBASIC16.08■□□□□ 0.16
Chmp1aQ921W0 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp1aQ921W0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp1aQ921W0 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp1aQ921W0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.08■□□□□ 0.16
Chmp1aQ921W0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp1aQ921W0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Chmp1aQ921W0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp1aQ921W0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Chmp1aQ921W0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp1aQ921W0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp1aQ921W0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp1aQ921W0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Chmp1aQ921W0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Chmp1aQ921W0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp1aQ921W0 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.06■□□□□ 0.16
Chmp1aQ921W0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp1aQ921W0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp1aQ921W0 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp1aQ921W0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.06■□□□□ 0.16
Chmp1aQ921W0 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.06■□□□□ 0.16
Chmp1aQ921W0 Spcs1-204ENSMUST00000226782 949 ntBASIC16.06■□□□□ 0.16
Chmp1aQ921W0 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp1aQ921W0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Chmp1aQ921W0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Chmp1aQ921W0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Chmp1aQ921W0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms