Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smc1bQ920F6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Smc1bQ920F6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc1bQ920F6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc1bQ920F6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc1bQ920F6 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc1bQ920F6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc1bQ920F6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.96■□□□□ 0.95
Smc1bQ920F6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc1bQ920F6 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.96■□□□□ 0.95
Smc1bQ920F6 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc1bQ920F6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Smc1bQ920F6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc1bQ920F6 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smc1bQ920F6 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.95■□□□□ 0.95
Smc1bQ920F6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Smc1bQ920F6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Smc1bQ920F6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc1bQ920F6 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Smc1bQ920F6 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Smc1bQ920F6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Smc1bQ920F6 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Smc1bQ920F6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Smc1bQ920F6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.95■□□□□ 0.94
Smc1bQ920F6 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smc1bQ920F6 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Smc1bQ920F6 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.94■□□□□ 0.94
Smc1bQ920F6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.94■□□□□ 0.94
Smc1bQ920F6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc1bQ920F6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc1bQ920F6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Smc1bQ920F6 Gm44549-201ENSMUST00000208351 577 ntBASIC20.94■□□□□ 0.94
Smc1bQ920F6 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC20.94■□□□□ 0.94
Smc1bQ920F6 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc1bQ920F6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc1bQ920F6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc1bQ920F6 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Smc1bQ920F6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Smc1bQ920F6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
Smc1bQ920F6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Smc1bQ920F6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.93■□□□□ 0.94
Smc1bQ920F6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc1bQ920F6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc1bQ920F6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Smc1bQ920F6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.93■□□□□ 0.94
Smc1bQ920F6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc1bQ920F6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Smc1bQ920F6 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc1bQ920F6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc1bQ920F6 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc1bQ920F6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc1bQ920F6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Smc1bQ920F6 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc1bQ920F6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.92■□□□□ 0.94
Smc1bQ920F6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc1bQ920F6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc1bQ920F6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc1bQ920F6 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.92■□□□□ 0.94
Smc1bQ920F6 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.92■□□□□ 0.94
Smc1bQ920F6 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Smc1bQ920F6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.92■□□□□ 0.94
Smc1bQ920F6 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.92■□□□□ 0.94
Smc1bQ920F6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc1bQ920F6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.92■□□□□ 0.94
Smc1bQ920F6 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc1bQ920F6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc1bQ920F6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Smc1bQ920F6 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc1bQ920F6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc1bQ920F6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc1bQ920F6 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.92■□□□□ 0.94
Smc1bQ920F6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.92■□□□□ 0.94
Smc1bQ920F6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc1bQ920F6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Smc1bQ920F6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.91■□□□□ 0.94
Smc1bQ920F6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc1bQ920F6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc1bQ920F6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.91■□□□□ 0.94
Smc1bQ920F6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc1bQ920F6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.91■□□□□ 0.94
Smc1bQ920F6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc1bQ920F6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.91■□□□□ 0.94
Smc1bQ920F6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Smc1bQ920F6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Smc1bQ920F6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Smc1bQ920F6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Smc1bQ920F6 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc1bQ920F6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc1bQ920F6 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smc1bQ920F6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smc1bQ920F6 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc1bQ920F6 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc1bQ920F6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc1bQ920F6 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc1bQ920F6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Smc1bQ920F6 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Smc1bQ920F6 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Smc1bQ920F6 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smc1bQ920F6 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Smc1bQ920F6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms