Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha3Q91Y16 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha3Q91Y16 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pcdha3Q91Y16 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Pcdha3Q91Y16 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdha3Q91Y16 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdha3Q91Y16 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdha3Q91Y16 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdha3Q91Y16 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdha3Q91Y16 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pcdha3Q91Y16 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
Pcdha3Q91Y16 Gm13148-201ENSMUST00000118892 745 ntBASIC19.08■□□□□ 0.64
Pcdha3Q91Y16 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha3Q91Y16 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha3Q91Y16 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha3Q91Y16 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Pcdha3Q91Y16 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha3Q91Y16 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pcdha3Q91Y16 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdha3Q91Y16 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha3Q91Y16 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha3Q91Y16 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha3Q91Y16 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdha3Q91Y16 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha3Q91Y16 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdha3Q91Y16 Gm5408-201ENSMUST00000197998 747 ntBASIC19.07■□□□□ 0.64
Pcdha3Q91Y16 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdha3Q91Y16 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.07■□□□□ 0.64
Pcdha3Q91Y16 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.07■□□□□ 0.64
Pcdha3Q91Y16 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha3Q91Y16 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha3Q91Y16 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha3Q91Y16 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha3Q91Y16 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pcdha3Q91Y16 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha3Q91Y16 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha3Q91Y16 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha3Q91Y16 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha3Q91Y16 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha3Q91Y16 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Pcdha3Q91Y16 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha3Q91Y16 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha3Q91Y16 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha3Q91Y16 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdha3Q91Y16 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha3Q91Y16 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha3Q91Y16 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha3Q91Y16 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha3Q91Y16 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha3Q91Y16 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Pcdha3Q91Y16 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.05■□□□□ 0.64
Pcdha3Q91Y16 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Pcdha3Q91Y16 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha3Q91Y16 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha3Q91Y16 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdha3Q91Y16 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pcdha3Q91Y16 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Pcdha3Q91Y16 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha3Q91Y16 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdha3Q91Y16 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Pcdha3Q91Y16 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdha3Q91Y16 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha3Q91Y16 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.04■□□□□ 0.64
Pcdha3Q91Y16 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdha3Q91Y16 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha3Q91Y16 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Pcdha3Q91Y16 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha3Q91Y16 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha3Q91Y16 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha3Q91Y16 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdha3Q91Y16 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.03■□□□□ 0.64
Pcdha3Q91Y16 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha3Q91Y16 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Pcdha3Q91Y16 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.03■□□□□ 0.64
Pcdha3Q91Y16 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha3Q91Y16 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha3Q91Y16 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.03■□□□□ 0.64
Pcdha3Q91Y16 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha3Q91Y16 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha3Q91Y16 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Pcdha3Q91Y16 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Pcdha3Q91Y16 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha3Q91Y16 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Pcdha3Q91Y16 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha3Q91Y16 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha3Q91Y16 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Pcdha3Q91Y16 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha3Q91Y16 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdha3Q91Y16 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Pcdha3Q91Y16 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha3Q91Y16 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha3Q91Y16 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha3Q91Y16 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Pcdha3Q91Y16 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.02■□□□□ 0.64
Pcdha3Q91Y16 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha3Q91Y16 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha3Q91Y16 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha3Q91Y16 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdha3Q91Y16 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.02■□□□□ 0.64
Pcdha3Q91Y16 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms