Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhac1Q91Y10 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhac1Q91Y10 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhac1Q91Y10 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhac1Q91Y10 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhac1Q91Y10 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhac1Q91Y10 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhac1Q91Y10 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhac1Q91Y10 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhac1Q91Y10 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhac1Q91Y10 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhac1Q91Y10 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdhac1Q91Y10 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhac1Q91Y10 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhac1Q91Y10 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 Gm9988-201ENSMUST00000069786 435 ntBASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhac1Q91Y10 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhac1Q91Y10 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhac1Q91Y10 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhac1Q91Y10 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhac1Q91Y10 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.06■□□□□ 0.32
Pcdhac1Q91Y10 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhac1Q91Y10 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhac1Q91Y10 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.06■□□□□ 0.32
Pcdhac1Q91Y10 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhac1Q91Y10 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhac1Q91Y10 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhac1Q91Y10 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Pcdhac1Q91Y10 Gm5874-201ENSMUST00000096101 508 ntBASIC17.06■□□□□ 0.32
Pcdhac1Q91Y10 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhac1Q91Y10 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhac1Q91Y10 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhac1Q91Y10 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhac1Q91Y10 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhac1Q91Y10 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhac1Q91Y10 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhac1Q91Y10 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhac1Q91Y10 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhac1Q91Y10 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.05■□□□□ 0.32
Pcdhac1Q91Y10 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhac1Q91Y10 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhac1Q91Y10 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhac1Q91Y10 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.05■□□□□ 0.32
Pcdhac1Q91Y10 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhac1Q91Y10 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.05■□□□□ 0.32
Pcdhac1Q91Y10 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhac1Q91Y10 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhac1Q91Y10 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhac1Q91Y10 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhac1Q91Y10 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhac1Q91Y10 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 Gm8495-201ENSMUST00000188740 694 ntBASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhac1Q91Y10 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhac1Q91Y10 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhac1Q91Y10 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhac1Q91Y10 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhac1Q91Y10 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhac1Q91Y10 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhac1Q91Y10 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhac1Q91Y10 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms