Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.54■□□□□ 0.4
Pcdhb20Q91XZ9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb20Q91XZ9 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC17.54■□□□□ 0.4
Pcdhb20Q91XZ9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb20Q91XZ9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb20Q91XZ9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb20Q91XZ9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb20Q91XZ9 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb20Q91XZ9 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdhb20Q91XZ9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb20Q91XZ9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb20Q91XZ9 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.54■□□□□ 0.4
Pcdhb20Q91XZ9 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.53■□□□□ 0.4
Pcdhb20Q91XZ9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb20Q91XZ9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhb20Q91XZ9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb20Q91XZ9 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb20Q91XZ9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb20Q91XZ9 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb20Q91XZ9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb20Q91XZ9 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.53■□□□□ 0.4
Pcdhb20Q91XZ9 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.53■□□□□ 0.4
Pcdhb20Q91XZ9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb20Q91XZ9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhb20Q91XZ9 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pcdhb20Q91XZ9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb20Q91XZ9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb20Q91XZ9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb20Q91XZ9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb20Q91XZ9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb20Q91XZ9 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb20Q91XZ9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb20Q91XZ9 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Pcdhb20Q91XZ9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb20Q91XZ9 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.52■□□□□ 0.4
Pcdhb20Q91XZ9 Flg-201ENSMUST00000050758 1488 ntBASIC17.52■□□□□ 0.4
Pcdhb20Q91XZ9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb20Q91XZ9 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC17.52■□□□□ 0.4
Pcdhb20Q91XZ9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb20Q91XZ9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhb20Q91XZ9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb20Q91XZ9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb20Q91XZ9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb20Q91XZ9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Pcdhb20Q91XZ9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb20Q91XZ9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb20Q91XZ9 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb20Q91XZ9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
Pcdhb20Q91XZ9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb20Q91XZ9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb20Q91XZ9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb20Q91XZ9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb20Q91XZ9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb20Q91XZ9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.51■□□□□ 0.39
Pcdhb20Q91XZ9 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.51■□□□□ 0.39
Pcdhb20Q91XZ9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb20Q91XZ9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.51■□□□□ 0.39
Pcdhb20Q91XZ9 Gm27275-201ENSMUST00000184318 272 ntBASIC17.51■□□□□ 0.39
Pcdhb20Q91XZ9 Gm6546-201ENSMUST00000192096 766 ntBASIC17.51■□□□□ 0.39
Pcdhb20Q91XZ9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdhb20Q91XZ9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.51■□□□□ 0.39
Pcdhb20Q91XZ9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb20Q91XZ9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb20Q91XZ9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Pcdhb20Q91XZ9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb20Q91XZ9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb20Q91XZ9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb20Q91XZ9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb20Q91XZ9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Pcdhb20Q91XZ9 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb20Q91XZ9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb20Q91XZ9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb20Q91XZ9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.5■□□□□ 0.39
Pcdhb20Q91XZ9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.5■□□□□ 0.39
Pcdhb20Q91XZ9 AC154634.3-201ENSMUST00000224589 736 ntBASIC17.5■□□□□ 0.39
Pcdhb20Q91XZ9 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.5■□□□□ 0.39
Pcdhb20Q91XZ9 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhb20Q91XZ9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb20Q91XZ9 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 Gm13168-201ENSMUST00000121771 632 ntBASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 Gm43377-201ENSMUST00000201640 455 ntBASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb20Q91XZ9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms