Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb4Q91XZ6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb4Q91XZ6 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.11■□□□□ 0.49
Pcdhb4Q91XZ6 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb4Q91XZ6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pcdhb4Q91XZ6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.11■□□□□ 0.49
Pcdhb4Q91XZ6 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb4Q91XZ6 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.11■□□□□ 0.49
Pcdhb4Q91XZ6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb4Q91XZ6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb4Q91XZ6 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb4Q91XZ6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb4Q91XZ6 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Pcdhb4Q91XZ6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb4Q91XZ6 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdhb4Q91XZ6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb4Q91XZ6 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhb4Q91XZ6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.1■□□□□ 0.49
Pcdhb4Q91XZ6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb4Q91XZ6 Gm13234-201ENSMUST00000120010 747 ntBASIC18.1■□□□□ 0.49
Pcdhb4Q91XZ6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcdhb4Q91XZ6 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Pcdhb4Q91XZ6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb4Q91XZ6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhb4Q91XZ6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb4Q91XZ6 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb4Q91XZ6 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb4Q91XZ6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb4Q91XZ6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb4Q91XZ6 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.09■□□□□ 0.49
Pcdhb4Q91XZ6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb4Q91XZ6 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb4Q91XZ6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb4Q91XZ6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb4Q91XZ6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb4Q91XZ6 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.09■□□□□ 0.49
Pcdhb4Q91XZ6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb4Q91XZ6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb4Q91XZ6 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdhb4Q91XZ6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb4Q91XZ6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdhb4Q91XZ6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb4Q91XZ6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb4Q91XZ6 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb4Q91XZ6 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb4Q91XZ6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdhb4Q91XZ6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb4Q91XZ6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.08■□□□□ 0.48
Pcdhb4Q91XZ6 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.08■□□□□ 0.48
Pcdhb4Q91XZ6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb4Q91XZ6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Pcdhb4Q91XZ6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Pcdhb4Q91XZ6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdhb4Q91XZ6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Pcdhb4Q91XZ6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb4Q91XZ6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb4Q91XZ6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb4Q91XZ6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.07■□□□□ 0.48
Pcdhb4Q91XZ6 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.07■□□□□ 0.48
Pcdhb4Q91XZ6 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb4Q91XZ6 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb4Q91XZ6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb4Q91XZ6 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb4Q91XZ6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Pcdhb4Q91XZ6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb4Q91XZ6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Pcdhb4Q91XZ6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb4Q91XZ6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb4Q91XZ6 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb4Q91XZ6 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb4Q91XZ6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb4Q91XZ6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdhb4Q91XZ6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdhb4Q91XZ6 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Pcdhb4Q91XZ6 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb4Q91XZ6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdhb4Q91XZ6 Gm13534-201ENSMUST00000121169 513 ntBASIC18.06■□□□□ 0.48
Pcdhb4Q91XZ6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb4Q91XZ6 Gm10493-201ENSMUST00000097270 612 ntBASIC18.06■□□□□ 0.48
Pcdhb4Q91XZ6 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.06■□□□□ 0.48
Pcdhb4Q91XZ6 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdhb4Q91XZ6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb4Q91XZ6 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb4Q91XZ6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb4Q91XZ6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhb4Q91XZ6 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb4Q91XZ6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdhb4Q91XZ6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Pcdhb4Q91XZ6 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb4Q91XZ6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdhb4Q91XZ6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb4Q91XZ6 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.05■□□□□ 0.48
Pcdhb4Q91XZ6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb4Q91XZ6 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb4Q91XZ6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb4Q91XZ6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb4Q91XZ6 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb4Q91XZ6 Gm42778-201ENSMUST00000199644 553 ntBASIC18.05■□□□□ 0.48
Pcdhb4Q91XZ6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdhb4Q91XZ6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms