Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb6Q91XZ4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb6Q91XZ4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb6Q91XZ4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb6Q91XZ4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb6Q91XZ4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb6Q91XZ4 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb6Q91XZ4 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb6Q91XZ4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb6Q91XZ4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdhb6Q91XZ4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb6Q91XZ4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.77■□□□□ 0.6
Pcdhb6Q91XZ4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb6Q91XZ4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb6Q91XZ4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.77■□□□□ 0.6
Pcdhb6Q91XZ4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb6Q91XZ4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.77■□□□□ 0.6
Pcdhb6Q91XZ4 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb6Q91XZ4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Pcdhb6Q91XZ4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb6Q91XZ4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb6Q91XZ4 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.77■□□□□ 0.6
Pcdhb6Q91XZ4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb6Q91XZ4 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb6Q91XZ4 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb6Q91XZ4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.77■□□□□ 0.59
Pcdhb6Q91XZ4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb6Q91XZ4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb6Q91XZ4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb6Q91XZ4 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb6Q91XZ4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.76■□□□□ 0.59
Pcdhb6Q91XZ4 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.76■□□□□ 0.59
Pcdhb6Q91XZ4 Gm13148-201ENSMUST00000118892 745 ntBASIC18.76■□□□□ 0.59
Pcdhb6Q91XZ4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdhb6Q91XZ4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcdhb6Q91XZ4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb6Q91XZ4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb6Q91XZ4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb6Q91XZ4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Pcdhb6Q91XZ4 Grk6-206ENSMUST00000224995 2971 ntBASIC18.76■□□□□ 0.59
Pcdhb6Q91XZ4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb6Q91XZ4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb6Q91XZ4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb6Q91XZ4 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb6Q91XZ4 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdhb6Q91XZ4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhb6Q91XZ4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdhb6Q91XZ4 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhb6Q91XZ4 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.75■□□□□ 0.59
Pcdhb6Q91XZ4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Pcdhb6Q91XZ4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.75■□□□□ 0.59
Pcdhb6Q91XZ4 Gm37179-201ENSMUST00000194862 823 ntBASIC18.75■□□□□ 0.59
Pcdhb6Q91XZ4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC18.75■□□□□ 0.59
Pcdhb6Q91XZ4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdhb6Q91XZ4 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb6Q91XZ4 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdhb6Q91XZ4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb6Q91XZ4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Pcdhb6Q91XZ4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb6Q91XZ4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Pcdhb6Q91XZ4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb6Q91XZ4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb6Q91XZ4 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdhb6Q91XZ4 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhb6Q91XZ4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb6Q91XZ4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb6Q91XZ4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb6Q91XZ4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb6Q91XZ4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb6Q91XZ4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb6Q91XZ4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb6Q91XZ4 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb6Q91XZ4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhb6Q91XZ4 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb6Q91XZ4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb6Q91XZ4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Pcdhb6Q91XZ4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb6Q91XZ4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdhb6Q91XZ4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.73■□□□□ 0.59
Pcdhb6Q91XZ4 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb6Q91XZ4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb6Q91XZ4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb6Q91XZ4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb6Q91XZ4 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb6Q91XZ4 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb6Q91XZ4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb6Q91XZ4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb6Q91XZ4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhb6Q91XZ4 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb6Q91XZ4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb6Q91XZ4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb6Q91XZ4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb6Q91XZ4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb6Q91XZ4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb6Q91XZ4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhb6Q91XZ4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhb6Q91XZ4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhb6Q91XZ4 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.72■□□□□ 0.59
Pcdhb6Q91XZ4 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhb6Q91XZ4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms