Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Ddx41Q91VN6 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx41Q91VN6 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Ddx41Q91VN6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx41Q91VN6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ddx41Q91VN6 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ddx41Q91VN6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Ddx41Q91VN6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Ddx41Q91VN6 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Ddx41Q91VN6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx41Q91VN6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.89■□□□□ 0.93
Ddx41Q91VN6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx41Q91VN6 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx41Q91VN6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Ddx41Q91VN6 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx41Q91VN6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx41Q91VN6 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx41Q91VN6 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx41Q91VN6 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx41Q91VN6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx41Q91VN6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx41Q91VN6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.88■□□□□ 0.93
Ddx41Q91VN6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.88■□□□□ 0.93
Ddx41Q91VN6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx41Q91VN6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx41Q91VN6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx41Q91VN6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx41Q91VN6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ddx41Q91VN6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx41Q91VN6 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx41Q91VN6 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx41Q91VN6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx41Q91VN6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx41Q91VN6 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx41Q91VN6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx41Q91VN6 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.87■□□□□ 0.93
Ddx41Q91VN6 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Ddx41Q91VN6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx41Q91VN6 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx41Q91VN6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx41Q91VN6 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx41Q91VN6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.86■□□□□ 0.93
Ddx41Q91VN6 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx41Q91VN6 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ddx41Q91VN6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx41Q91VN6 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx41Q91VN6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx41Q91VN6 Gm12896-201ENSMUST00000118430 226 ntBASIC20.85■□□□□ 0.93
Ddx41Q91VN6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx41Q91VN6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx41Q91VN6 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.85■□□□□ 0.93
Ddx41Q91VN6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.85■□□□□ 0.93
Ddx41Q91VN6 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.85■□□□□ 0.93
Ddx41Q91VN6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.85■□□□□ 0.93
Ddx41Q91VN6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx41Q91VN6 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx41Q91VN6 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx41Q91VN6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ddx41Q91VN6 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.85■□□□□ 0.93
Ddx41Q91VN6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx41Q91VN6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx41Q91VN6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx41Q91VN6 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.84■□□□□ 0.93
Ddx41Q91VN6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Ddx41Q91VN6 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.84■□□□□ 0.93
Ddx41Q91VN6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Ddx41Q91VN6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx41Q91VN6 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Ddx41Q91VN6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ddx41Q91VN6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx41Q91VN6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx41Q91VN6 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx41Q91VN6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx41Q91VN6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx41Q91VN6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx41Q91VN6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
Ddx41Q91VN6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.83■□□□□ 0.93
Ddx41Q91VN6 Gm27275-201ENSMUST00000184318 272 ntBASIC20.83■□□□□ 0.93
Ddx41Q91VN6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.83■□□□□ 0.93
Ddx41Q91VN6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx41Q91VN6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ddx41Q91VN6 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.83■□□□□ 0.92
Ddx41Q91VN6 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
Ddx41Q91VN6 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ddx41Q91VN6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ddx41Q91VN6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ddx41Q91VN6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
Ddx41Q91VN6 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ddx41Q91VN6 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.82■□□□□ 0.92
Ddx41Q91VN6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.82■□□□□ 0.92
Ddx41Q91VN6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ddx41Q91VN6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Ddx41Q91VN6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx41Q91VN6 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx41Q91VN6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx41Q91VN6 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx41Q91VN6 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx41Q91VN6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ddx41Q91VN6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ddx41Q91VN6 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms