Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vsx1Q91V10 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vsx1Q91V10 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Vsx1Q91V10 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Vsx1Q91V10 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Vsx1Q91V10 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vsx1Q91V10 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Vsx1Q91V10 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vsx1Q91V10 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vsx1Q91V10 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.06■□□□□ 0.48
Vsx1Q91V10 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vsx1Q91V10 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vsx1Q91V10 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vsx1Q91V10 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vsx1Q91V10 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC18.06■□□□□ 0.48
Vsx1Q91V10 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vsx1Q91V10 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vsx1Q91V10 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Vsx1Q91V10 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Vsx1Q91V10 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
Vsx1Q91V10 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vsx1Q91V10 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vsx1Q91V10 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Vsx1Q91V10 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.05■□□□□ 0.48
Vsx1Q91V10 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Vsx1Q91V10 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.05■□□□□ 0.48
Vsx1Q91V10 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vsx1Q91V10 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vsx1Q91V10 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Vsx1Q91V10 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Vsx1Q91V10 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vsx1Q91V10 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vsx1Q91V10 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vsx1Q91V10 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Vsx1Q91V10 Gm43183-201ENSMUST00000200632 547 ntBASIC18.04■□□□□ 0.48
Vsx1Q91V10 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.04■□□□□ 0.48
Vsx1Q91V10 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vsx1Q91V10 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vsx1Q91V10 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vsx1Q91V10 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vsx1Q91V10 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Vsx1Q91V10 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vsx1Q91V10 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vsx1Q91V10 Flg-201ENSMUST00000050758 1488 ntBASIC18.03■□□□□ 0.48
Vsx1Q91V10 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.03■□□□□ 0.48
Vsx1Q91V10 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.03■□□□□ 0.48
Vsx1Q91V10 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vsx1Q91V10 Gm10517-202ENSMUST00000192970 758 ntBASIC18.03■□□□□ 0.48
Vsx1Q91V10 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.03■□□□□ 0.48
Vsx1Q91V10 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vsx1Q91V10 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vsx1Q91V10 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Vsx1Q91V10 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vsx1Q91V10 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vsx1Q91V10 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.02■□□□□ 0.48
Vsx1Q91V10 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Vsx1Q91V10 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vsx1Q91V10 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vsx1Q91V10 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vsx1Q91V10 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Vsx1Q91V10 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.02■□□□□ 0.48
Vsx1Q91V10 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.02■□□□□ 0.48
Vsx1Q91V10 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vsx1Q91V10 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Vsx1Q91V10 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.02■□□□□ 0.48
Vsx1Q91V10 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vsx1Q91V10 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Vsx1Q91V10 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Vsx1Q91V10 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Vsx1Q91V10 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vsx1Q91V10 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vsx1Q91V10 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vsx1Q91V10 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Vsx1Q91V10 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vsx1Q91V10 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vsx1Q91V10 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vsx1Q91V10 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Vsx1Q91V10 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.01■□□□□ 0.47
Vsx1Q91V10 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.01■□□□□ 0.47
Vsx1Q91V10 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vsx1Q91V10 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vsx1Q91V10 Mtag2-201ENSMUST00000058665 714 ntBASIC18.01■□□□□ 0.47
Vsx1Q91V10 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Vsx1Q91V10 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vsx1Q91V10 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vsx1Q91V10 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Vsx1Q91V10 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vsx1Q91V10 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Vsx1Q91V10 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Vsx1Q91V10 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vsx1Q91V10 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18■□□□□ 0.47
Vsx1Q91V10 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vsx1Q91V10 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vsx1Q91V10 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vsx1Q91V10 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18■□□□□ 0.47
Vsx1Q91V10 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Vsx1Q91V10 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18■□□□□ 0.47
Vsx1Q91V10 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18■□□□□ 0.47
Vsx1Q91V10 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Vsx1Q91V10 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms