Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm37292-201ENSMUST00000192062 758 ntBASIC15.73■□□□□ 0.11
Cspg4Q8VHY0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cspg4Q8VHY0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cspg4Q8VHY0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cspg4Q8VHY0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cspg4Q8VHY0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cspg4Q8VHY0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cspg4Q8VHY0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Cspg4Q8VHY0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cspg4Q8VHY0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cspg4Q8VHY0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.72■□□□□ 0.11
Cspg4Q8VHY0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cspg4Q8VHY0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cspg4Q8VHY0 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.72■□□□□ 0.11
Cspg4Q8VHY0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cspg4Q8VHY0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.72■□□□□ 0.11
Cspg4Q8VHY0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.72■□□□□ 0.11
Cspg4Q8VHY0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.72■□□□□ 0.11
Cspg4Q8VHY0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cspg4Q8VHY0 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.71■□□□□ 0.11
Cspg4Q8VHY0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cspg4Q8VHY0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cspg4Q8VHY0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.71■□□□□ 0.11
Cspg4Q8VHY0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cspg4Q8VHY0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cspg4Q8VHY0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cspg4Q8VHY0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Cspg4Q8VHY0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
Cspg4Q8VHY0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cspg4Q8VHY0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cspg4Q8VHY0 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cspg4Q8VHY0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cspg4Q8VHY0 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.7■□□□□ 0.1
Cspg4Q8VHY0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
Cspg4Q8VHY0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cspg4Q8VHY0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cspg4Q8VHY0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cspg4Q8VHY0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.7■□□□□ 0.1
Cspg4Q8VHY0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cspg4Q8VHY0 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg4Q8VHY0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg4Q8VHY0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Cspg4Q8VHY0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.69■□□□□ 0.1
Cspg4Q8VHY0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cspg4Q8VHY0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cspg4Q8VHY0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cspg4Q8VHY0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Gm17807-201ENSMUST00000186869 298 ntBASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Mir6349-201ENSMUST00000184059 97 ntBASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Gm37935-201ENSMUST00000192012 982 ntBASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cspg4Q8VHY0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg4Q8VHY0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg4Q8VHY0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Cspg4Q8VHY0 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.67■□□□□ 0.1
Cspg4Q8VHY0 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg4Q8VHY0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.67■□□□□ 0.1
Cspg4Q8VHY0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg4Q8VHY0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg4Q8VHY0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg4Q8VHY0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.67■□□□□ 0.1
Cspg4Q8VHY0 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.67■□□□□ 0.1
Cspg4Q8VHY0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg4Q8VHY0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg4Q8VHY0 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg4Q8VHY0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Cspg4Q8VHY0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cspg4Q8VHY0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg4Q8VHY0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg4Q8VHY0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg4Q8VHY0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg4Q8VHY0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg4Q8VHY0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg4Q8VHY0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg4Q8VHY0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg4Q8VHY0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg4Q8VHY0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cspg4Q8VHY0 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg4Q8VHY0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg4Q8VHY0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cspg4Q8VHY0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cspg4Q8VHY0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms