Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkd2Q8VE28 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkd2Q8VE28 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkd2Q8VE28 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nkd2Q8VE28 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nkd2Q8VE28 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Nkd2Q8VE28 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkd2Q8VE28 Gm6420-201ENSMUST00000193885 723 ntBASIC16.63■□□□□ 0.25
Nkd2Q8VE28 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
Nkd2Q8VE28 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkd2Q8VE28 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkd2Q8VE28 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nkd2Q8VE28 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nkd2Q8VE28 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkd2Q8VE28 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkd2Q8VE28 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Nkd2Q8VE28 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nkd2Q8VE28 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkd2Q8VE28 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkd2Q8VE28 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkd2Q8VE28 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkd2Q8VE28 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkd2Q8VE28 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.62■□□□□ 0.25
Nkd2Q8VE28 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Nkd2Q8VE28 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkd2Q8VE28 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Nkd2Q8VE28 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkd2Q8VE28 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkd2Q8VE28 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkd2Q8VE28 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.62■□□□□ 0.25
Nkd2Q8VE28 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.62■□□□□ 0.25
Nkd2Q8VE28 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkd2Q8VE28 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkd2Q8VE28 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkd2Q8VE28 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkd2Q8VE28 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkd2Q8VE28 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkd2Q8VE28 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkd2Q8VE28 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Nkd2Q8VE28 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Nkd2Q8VE28 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.61■□□□□ 0.25
Nkd2Q8VE28 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.61■□□□□ 0.25
Nkd2Q8VE28 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkd2Q8VE28 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Nkd2Q8VE28 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkd2Q8VE28 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Nkd2Q8VE28 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkd2Q8VE28 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkd2Q8VE28 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkd2Q8VE28 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkd2Q8VE28 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.6■□□□□ 0.25
Nkd2Q8VE28 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkd2Q8VE28 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkd2Q8VE28 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkd2Q8VE28 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkd2Q8VE28 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkd2Q8VE28 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Nkd2Q8VE28 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.6■□□□□ 0.25
Nkd2Q8VE28 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkd2Q8VE28 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkd2Q8VE28 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.6■□□□□ 0.25
Nkd2Q8VE28 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Nkd2Q8VE28 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Nkd2Q8VE28 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkd2Q8VE28 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkd2Q8VE28 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nkd2Q8VE28 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkd2Q8VE28 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkd2Q8VE28 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.59■□□□□ 0.25
Nkd2Q8VE28 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkd2Q8VE28 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Nkd2Q8VE28 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkd2Q8VE28 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkd2Q8VE28 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Nkd2Q8VE28 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Nkd2Q8VE28 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkd2Q8VE28 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkd2Q8VE28 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkd2Q8VE28 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nkd2Q8VE28 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms