Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rprd1aQ8VDS4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.77■□□□□ 0.6
Rprd1aQ8VDS4 Gm44549-201ENSMUST00000208351 577 ntBASIC18.77■□□□□ 0.6
Rprd1aQ8VDS4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rprd1aQ8VDS4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rprd1aQ8VDS4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rprd1aQ8VDS4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rprd1aQ8VDS4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Rprd1aQ8VDS4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rprd1aQ8VDS4 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rprd1aQ8VDS4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rprd1aQ8VDS4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rprd1aQ8VDS4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rprd1aQ8VDS4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.76■□□□□ 0.59
Rprd1aQ8VDS4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rprd1aQ8VDS4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rprd1aQ8VDS4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rprd1aQ8VDS4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.76■□□□□ 0.59
Rprd1aQ8VDS4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rprd1aQ8VDS4 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.76■□□□□ 0.59
Rprd1aQ8VDS4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rprd1aQ8VDS4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rprd1aQ8VDS4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rprd1aQ8VDS4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rprd1aQ8VDS4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rprd1aQ8VDS4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rprd1aQ8VDS4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rprd1aQ8VDS4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Gm20049-201ENSMUST00000219950 730 ntBASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rprd1aQ8VDS4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rprd1aQ8VDS4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Rprd1aQ8VDS4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rprd1aQ8VDS4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rprd1aQ8VDS4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rprd1aQ8VDS4 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.74■□□□□ 0.59
Rprd1aQ8VDS4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rprd1aQ8VDS4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rprd1aQ8VDS4 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rprd1aQ8VDS4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Rprd1aQ8VDS4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rprd1aQ8VDS4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
Rprd1aQ8VDS4 Gm22325-201ENSMUST00000158904 308 ntBASIC18.74■□□□□ 0.59
Rprd1aQ8VDS4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rprd1aQ8VDS4 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rprd1aQ8VDS4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rprd1aQ8VDS4 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rprd1aQ8VDS4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rprd1aQ8VDS4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rprd1aQ8VDS4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Rprd1aQ8VDS4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rprd1aQ8VDS4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rprd1aQ8VDS4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rprd1aQ8VDS4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rprd1aQ8VDS4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.73■□□□□ 0.59
Rprd1aQ8VDS4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rprd1aQ8VDS4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.73■□□□□ 0.59
Rprd1aQ8VDS4 Gm12527-201ENSMUST00000117967 564 ntBASIC18.73■□□□□ 0.59
Rprd1aQ8VDS4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.73■□□□□ 0.59
Rprd1aQ8VDS4 Gm27011-201ENSMUST00000182352 972 ntBASIC18.73■□□□□ 0.59
Rprd1aQ8VDS4 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.73■□□□□ 0.59
Rprd1aQ8VDS4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rprd1aQ8VDS4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Rprd1aQ8VDS4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rprd1aQ8VDS4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rprd1aQ8VDS4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
Rprd1aQ8VDS4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rprd1aQ8VDS4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rprd1aQ8VDS4 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.72■□□□□ 0.59
Rprd1aQ8VDS4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Rprd1aQ8VDS4 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rprd1aQ8VDS4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Rprd1aQ8VDS4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rprd1aQ8VDS4 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rprd1aQ8VDS4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC18.72■□□□□ 0.59
Rprd1aQ8VDS4 Gm2559-201ENSMUST00000201323 363 ntBASIC18.72■□□□□ 0.59
Rprd1aQ8VDS4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rprd1aQ8VDS4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rprd1aQ8VDS4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.72■□□□□ 0.59
Rprd1aQ8VDS4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rprd1aQ8VDS4 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms