Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a20aQ8VDB9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a20aQ8VDB9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a20aQ8VDB9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a20aQ8VDB9 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.02■□□□□ 0.48
Slc6a20aQ8VDB9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a20aQ8VDB9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a20aQ8VDB9 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.02■□□□□ 0.48
Slc6a20aQ8VDB9 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a20aQ8VDB9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a20aQ8VDB9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc6a20aQ8VDB9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc6a20aQ8VDB9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Slc6a20aQ8VDB9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc6a20aQ8VDB9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc6a20aQ8VDB9 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Slc6a20aQ8VDB9 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.01■□□□□ 0.47
Slc6a20aQ8VDB9 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a20aQ8VDB9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Slc6a20aQ8VDB9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a20aQ8VDB9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Slc6a20aQ8VDB9 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.01■□□□□ 0.47
Slc6a20aQ8VDB9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a20aQ8VDB9 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a20aQ8VDB9 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.01■□□□□ 0.47
Slc6a20aQ8VDB9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a20aQ8VDB9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a20aQ8VDB9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Slc6a20aQ8VDB9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Slc6a20aQ8VDB9 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.01■□□□□ 0.47
Slc6a20aQ8VDB9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a20aQ8VDB9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a20aQ8VDB9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18■□□□□ 0.47
Slc6a20aQ8VDB9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Slc6a20aQ8VDB9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Slc6a20aQ8VDB9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a20aQ8VDB9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a20aQ8VDB9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Slc6a20aQ8VDB9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18■□□□□ 0.47
Slc6a20aQ8VDB9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a20aQ8VDB9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a20aQ8VDB9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a20aQ8VDB9 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a20aQ8VDB9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a20aQ8VDB9 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20aQ8VDB9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20aQ8VDB9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Slc6a20aQ8VDB9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20aQ8VDB9 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20aQ8VDB9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20aQ8VDB9 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20aQ8VDB9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.99■□□□□ 0.47
Slc6a20aQ8VDB9 Gm26571-201ENSMUST00000181399 666 ntBASIC17.99■□□□□ 0.47
Slc6a20aQ8VDB9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20aQ8VDB9 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20aQ8VDB9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20aQ8VDB9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20aQ8VDB9 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20aQ8VDB9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20aQ8VDB9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a20aQ8VDB9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a20aQ8VDB9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a20aQ8VDB9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
Slc6a20aQ8VDB9 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Slc6a20aQ8VDB9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a20aQ8VDB9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a20aQ8VDB9 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Slc6a20aQ8VDB9 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a20aQ8VDB9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a20aQ8VDB9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a20aQ8VDB9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a20aQ8VDB9 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a20aQ8VDB9 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a20aQ8VDB9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a20aQ8VDB9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Slc6a20aQ8VDB9 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Slc6a20aQ8VDB9 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Slc6a20aQ8VDB9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.96■□□□□ 0.47
Slc6a20aQ8VDB9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms