Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Tgds-204ENSMUST00000228543 1594 ntBASIC17.49■□□□□ 0.39
Lsm1Q8VC85 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm1Q8VC85 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm1Q8VC85 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm1Q8VC85 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm1Q8VC85 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm1Q8VC85 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm1Q8VC85 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm1Q8VC85 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm1Q8VC85 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Lsm1Q8VC85 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm1Q8VC85 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lsm1Q8VC85 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Lsm1Q8VC85 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm1Q8VC85 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm1Q8VC85 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm1Q8VC85 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm1Q8VC85 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Lsm1Q8VC85 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.48■□□□□ 0.39
Lsm1Q8VC85 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm1Q8VC85 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm1Q8VC85 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm1Q8VC85 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.48■□□□□ 0.39
Lsm1Q8VC85 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.48■□□□□ 0.39
Lsm1Q8VC85 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm1Q8VC85 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm1Q8VC85 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm1Q8VC85 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm1Q8VC85 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm1Q8VC85 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lsm1Q8VC85 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm1Q8VC85 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm1Q8VC85 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm1Q8VC85 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm1Q8VC85 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm1Q8VC85 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.47■□□□□ 0.39
Lsm1Q8VC85 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm1Q8VC85 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.47■□□□□ 0.39
Lsm1Q8VC85 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.47■□□□□ 0.39
Lsm1Q8VC85 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.47■□□□□ 0.39
Lsm1Q8VC85 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm1Q8VC85 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm1Q8VC85 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Lsm1Q8VC85 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm1Q8VC85 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm1Q8VC85 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm1Q8VC85 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm1Q8VC85 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.47■□□□□ 0.39
Lsm1Q8VC85 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lsm1Q8VC85 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Lsm1Q8VC85 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm1Q8VC85 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Lsm1Q8VC85 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm1Q8VC85 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm1Q8VC85 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm1Q8VC85 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm1Q8VC85 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.46■□□□□ 0.39
Lsm1Q8VC85 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm1Q8VC85 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.46■□□□□ 0.39
Lsm1Q8VC85 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.46■□□□□ 0.39
Lsm1Q8VC85 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm1Q8VC85 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm1Q8VC85 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm1Q8VC85 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lsm1Q8VC85 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Lsm1Q8VC85 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Lsm1Q8VC85 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm1Q8VC85 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Lsm1Q8VC85 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm1Q8VC85 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.45■□□□□ 0.38
Lsm1Q8VC85 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm1Q8VC85 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Lsm1Q8VC85 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm1Q8VC85 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Lsm1Q8VC85 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Lsm1Q8VC85 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.45■□□□□ 0.38
Lsm1Q8VC85 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm1Q8VC85 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm1Q8VC85 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm1Q8VC85 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Lsm1Q8VC85 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm1Q8VC85 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Lsm1Q8VC85 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm1Q8VC85 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm1Q8VC85 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm1Q8VC85 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm1Q8VC85 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Lsm1Q8VC85 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm1Q8VC85 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm1Q8VC85 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.43■□□□□ 0.38
Lsm1Q8VC85 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm1Q8VC85 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.43■□□□□ 0.38
Lsm1Q8VC85 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm1Q8VC85 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm1Q8VC85 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm1Q8VC85 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.43■□□□□ 0.38
Lsm1Q8VC85 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm1Q8VC85 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.43■□□□□ 0.38
Lsm1Q8VC85 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Lsm1Q8VC85 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms