Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap2Q8VC34 AC123834.2-201ENSMUST00000224038 2340 ntBASIC20.05■□□□□ 0.8
Rpap2Q8VC34 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap2Q8VC34 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.05■□□□□ 0.8
Rpap2Q8VC34 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.05■□□□□ 0.8
Rpap2Q8VC34 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap2Q8VC34 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rpap2Q8VC34 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Rpap2Q8VC34 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rpap2Q8VC34 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpap2Q8VC34 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rpap2Q8VC34 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpap2Q8VC34 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpap2Q8VC34 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.04■□□□□ 0.8
Rpap2Q8VC34 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.04■□□□□ 0.8
Rpap2Q8VC34 Rab3c-203ENSMUST00000224180 967 ntBASIC20.04■□□□□ 0.8
Rpap2Q8VC34 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpap2Q8VC34 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpap2Q8VC34 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rpap2Q8VC34 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.04■□□□□ 0.8
Rpap2Q8VC34 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpap2Q8VC34 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Rpap2Q8VC34 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpap2Q8VC34 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpap2Q8VC34 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpap2Q8VC34 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.03■□□□□ 0.8
Rpap2Q8VC34 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rpap2Q8VC34 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.03■□□□□ 0.8
Rpap2Q8VC34 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Rpap2Q8VC34 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpap2Q8VC34 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpap2Q8VC34 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Rpap2Q8VC34 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Rpap2Q8VC34 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rpap2Q8VC34 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpap2Q8VC34 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpap2Q8VC34 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpap2Q8VC34 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rpap2Q8VC34 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Rpap2Q8VC34 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpap2Q8VC34 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Rpap2Q8VC34 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpap2Q8VC34 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpap2Q8VC34 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.02■□□□□ 0.8
Rpap2Q8VC34 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.02■□□□□ 0.8
Rpap2Q8VC34 Gm44549-201ENSMUST00000208351 577 ntBASIC20.02■□□□□ 0.8
Rpap2Q8VC34 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Rpap2Q8VC34 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpap2Q8VC34 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Rpap2Q8VC34 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Rpap2Q8VC34 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Rpap2Q8VC34 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rpap2Q8VC34 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rpap2Q8VC34 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpap2Q8VC34 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpap2Q8VC34 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpap2Q8VC34 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpap2Q8VC34 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpap2Q8VC34 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.01■□□□□ 0.79
Rpap2Q8VC34 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpap2Q8VC34 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.01■□□□□ 0.79
Rpap2Q8VC34 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rpap2Q8VC34 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Rpap2Q8VC34 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpap2Q8VC34 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpap2Q8VC34 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rpap2Q8VC34 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
Rpap2Q8VC34 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rpap2Q8VC34 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpap2Q8VC34 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Rpap2Q8VC34 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rpap2Q8VC34 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpap2Q8VC34 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpap2Q8VC34 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Rpap2Q8VC34 Tgds-204ENSMUST00000228543 1594 ntBASIC20■□□□□ 0.79
Rpap2Q8VC34 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rpap2Q8VC34 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpap2Q8VC34 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpap2Q8VC34 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
Rpap2Q8VC34 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpap2Q8VC34 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpap2Q8VC34 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpap2Q8VC34 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Rpap2Q8VC34 Gm5408-201ENSMUST00000197998 747 ntBASIC19.99■□□□□ 0.79
Rpap2Q8VC34 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpap2Q8VC34 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.99■□□□□ 0.79
Rpap2Q8VC34 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rpap2Q8VC34 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rpap2Q8VC34 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rpap2Q8VC34 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.98■□□□□ 0.79
Rpap2Q8VC34 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpap2Q8VC34 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpap2Q8VC34 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Rpap2Q8VC34 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.98■□□□□ 0.79
Rpap2Q8VC34 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rpap2Q8VC34 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.98■□□□□ 0.79
Rpap2Q8VC34 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.98■□□□□ 0.79
Rpap2Q8VC34 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpap2Q8VC34 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rpap2Q8VC34 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms