Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.32■□□□□ 0.52
Vps39Q8R5L3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.32■□□□□ 0.52
Vps39Q8R5L3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Vps39Q8R5L3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps39Q8R5L3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps39Q8R5L3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps39Q8R5L3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps39Q8R5L3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps39Q8R5L3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.31■□□□□ 0.52
Vps39Q8R5L3 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps39Q8R5L3 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps39Q8R5L3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps39Q8R5L3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps39Q8R5L3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps39Q8R5L3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps39Q8R5L3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps39Q8R5L3 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.31■□□□□ 0.52
Vps39Q8R5L3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps39Q8R5L3 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps39Q8R5L3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Vps39Q8R5L3 Grk6-206ENSMUST00000224995 2971 ntBASIC18.3■□□□□ 0.52
Vps39Q8R5L3 Gm10493-201ENSMUST00000097270 612 ntBASIC18.3■□□□□ 0.52
Vps39Q8R5L3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vps39Q8R5L3 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Vps39Q8R5L3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps39Q8R5L3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Vps39Q8R5L3 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps39Q8R5L3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps39Q8R5L3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps39Q8R5L3 Gm37805-201ENSMUST00000192612 1094 ntBASIC18.29■□□□□ 0.52
Vps39Q8R5L3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vps39Q8R5L3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps39Q8R5L3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.29■□□□□ 0.52
Vps39Q8R5L3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps39Q8R5L3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.29■□□□□ 0.52
Vps39Q8R5L3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps39Q8R5L3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps39Q8R5L3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vps39Q8R5L3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Vps39Q8R5L3 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
Vps39Q8R5L3 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps39Q8R5L3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.28■□□□□ 0.52
Vps39Q8R5L3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps39Q8R5L3 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Vps39Q8R5L3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps39Q8R5L3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps39Q8R5L3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.28■□□□□ 0.52
Vps39Q8R5L3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps39Q8R5L3 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.28■□□□□ 0.52
Vps39Q8R5L3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps39Q8R5L3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Vps39Q8R5L3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps39Q8R5L3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vps39Q8R5L3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.27■□□□□ 0.52
Vps39Q8R5L3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.27■□□□□ 0.52
Vps39Q8R5L3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps39Q8R5L3 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vps39Q8R5L3 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps39Q8R5L3 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Vps39Q8R5L3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vps39Q8R5L3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.27■□□□□ 0.52
Vps39Q8R5L3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps39Q8R5L3 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.27■□□□□ 0.52
Vps39Q8R5L3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vps39Q8R5L3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps39Q8R5L3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps39Q8R5L3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vps39Q8R5L3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Vps39Q8R5L3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.51
Vps39Q8R5L3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vps39Q8R5L3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps39Q8R5L3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps39Q8R5L3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps39Q8R5L3 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps39Q8R5L3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps39Q8R5L3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.26■□□□□ 0.51
Vps39Q8R5L3 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.26■□□□□ 0.51
Vps39Q8R5L3 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.26■□□□□ 0.51
Vps39Q8R5L3 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.26■□□□□ 0.51
Vps39Q8R5L3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.26■□□□□ 0.51
Vps39Q8R5L3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps39Q8R5L3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Vps39Q8R5L3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vps39Q8R5L3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.26■□□□□ 0.51
Vps39Q8R5L3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Vps39Q8R5L3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vps39Q8R5L3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vps39Q8R5L3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms