Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdt1Q8R4E9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdt1Q8R4E9 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdt1Q8R4E9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdt1Q8R4E9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdt1Q8R4E9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdt1Q8R4E9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdt1Q8R4E9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cdt1Q8R4E9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Cdt1Q8R4E9 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdt1Q8R4E9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdt1Q8R4E9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cdt1Q8R4E9 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 Gm13836-201ENSMUST00000121159 501 ntBASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cdt1Q8R4E9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Cdt1Q8R4E9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdt1Q8R4E9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdt1Q8R4E9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdt1Q8R4E9 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdt1Q8R4E9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdt1Q8R4E9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdt1Q8R4E9 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cdt1Q8R4E9 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.62■□□□□ 0.41
Cdt1Q8R4E9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdt1Q8R4E9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Cdt1Q8R4E9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdt1Q8R4E9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdt1Q8R4E9 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cdt1Q8R4E9 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cdt1Q8R4E9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdt1Q8R4E9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdt1Q8R4E9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdt1Q8R4E9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cdt1Q8R4E9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
Cdt1Q8R4E9 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdt1Q8R4E9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.61■□□□□ 0.41
Cdt1Q8R4E9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.61■□□□□ 0.41
Cdt1Q8R4E9 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cdt1Q8R4E9 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cdt1Q8R4E9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdt1Q8R4E9 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdt1Q8R4E9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cdt1Q8R4E9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cdt1Q8R4E9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cdt1Q8R4E9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdt1Q8R4E9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdt1Q8R4E9 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.6■□□□□ 0.41
Cdt1Q8R4E9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.6■□□□□ 0.41
Cdt1Q8R4E9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdt1Q8R4E9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdt1Q8R4E9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdt1Q8R4E9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdt1Q8R4E9 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdt1Q8R4E9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cdt1Q8R4E9 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdt1Q8R4E9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdt1Q8R4E9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.6■□□□□ 0.41
Cdt1Q8R4E9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdt1Q8R4E9 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdt1Q8R4E9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cdt1Q8R4E9 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.6■□□□□ 0.41
Cdt1Q8R4E9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Cdt1Q8R4E9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms