Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cuedc1Q8R3V6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cuedc1Q8R3V6 Gm7860-201ENSMUST00000121190 879 ntBASIC16.51■□□□□ 0.23
Cuedc1Q8R3V6 Gm27032-201ENSMUST00000183124 1116 ntBASIC16.51■□□□□ 0.23
Cuedc1Q8R3V6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cuedc1Q8R3V6 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cuedc1Q8R3V6 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cuedc1Q8R3V6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cuedc1Q8R3V6 Dio3-201ENSMUST00000097228 1449 ntBASIC16.51■□□□□ 0.23
Cuedc1Q8R3V6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cuedc1Q8R3V6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cuedc1Q8R3V6 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Cuedc1Q8R3V6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.51■□□□□ 0.23
Cuedc1Q8R3V6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cuedc1Q8R3V6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cuedc1Q8R3V6 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.5■□□□□ 0.23
Cuedc1Q8R3V6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cuedc1Q8R3V6 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cuedc1Q8R3V6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cuedc1Q8R3V6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cuedc1Q8R3V6 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cuedc1Q8R3V6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cuedc1Q8R3V6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cuedc1Q8R3V6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cuedc1Q8R3V6 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cuedc1Q8R3V6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.5■□□□□ 0.23
Cuedc1Q8R3V6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cuedc1Q8R3V6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.5■□□□□ 0.23
Cuedc1Q8R3V6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.5■□□□□ 0.23
Cuedc1Q8R3V6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cuedc1Q8R3V6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
Cuedc1Q8R3V6 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.5■□□□□ 0.23
Cuedc1Q8R3V6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cuedc1Q8R3V6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.5■□□□□ 0.23
Cuedc1Q8R3V6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cuedc1Q8R3V6 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cuedc1Q8R3V6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cuedc1Q8R3V6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cuedc1Q8R3V6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cuedc1Q8R3V6 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cuedc1Q8R3V6 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cuedc1Q8R3V6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cuedc1Q8R3V6 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cuedc1Q8R3V6 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Cuedc1Q8R3V6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cuedc1Q8R3V6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.48■□□□□ 0.23
Cuedc1Q8R3V6 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.48■□□□□ 0.23
Cuedc1Q8R3V6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cuedc1Q8R3V6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cuedc1Q8R3V6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cuedc1Q8R3V6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cuedc1Q8R3V6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cuedc1Q8R3V6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cuedc1Q8R3V6 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cuedc1Q8R3V6 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cuedc1Q8R3V6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cuedc1Q8R3V6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cuedc1Q8R3V6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cuedc1Q8R3V6 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cuedc1Q8R3V6 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.47■□□□□ 0.23
Cuedc1Q8R3V6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Cuedc1Q8R3V6 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cuedc1Q8R3V6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cuedc1Q8R3V6 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cuedc1Q8R3V6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cuedc1Q8R3V6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cuedc1Q8R3V6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cuedc1Q8R3V6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cuedc1Q8R3V6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cuedc1Q8R3V6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cuedc1Q8R3V6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cuedc1Q8R3V6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cuedc1Q8R3V6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cuedc1Q8R3V6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cuedc1Q8R3V6 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cuedc1Q8R3V6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Cuedc1Q8R3V6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cuedc1Q8R3V6 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cuedc1Q8R3V6 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Cuedc1Q8R3V6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms