Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slf1Q8R3P9 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slf1Q8R3P9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.42■□□□□ 0.54
Slf1Q8R3P9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Slf1Q8R3P9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Slf1Q8R3P9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Slf1Q8R3P9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slf1Q8R3P9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Slf1Q8R3P9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.42■□□□□ 0.54
Slf1Q8R3P9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slf1Q8R3P9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slf1Q8R3P9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slf1Q8R3P9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slf1Q8R3P9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slf1Q8R3P9 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.41■□□□□ 0.54
Slf1Q8R3P9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slf1Q8R3P9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slf1Q8R3P9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slf1Q8R3P9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slf1Q8R3P9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slf1Q8R3P9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Slf1Q8R3P9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Slf1Q8R3P9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.41■□□□□ 0.54
Slf1Q8R3P9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slf1Q8R3P9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Slf1Q8R3P9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slf1Q8R3P9 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Slf1Q8R3P9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Slf1Q8R3P9 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Slf1Q8R3P9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slf1Q8R3P9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slf1Q8R3P9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slf1Q8R3P9 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slf1Q8R3P9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Slf1Q8R3P9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slf1Q8R3P9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
Slf1Q8R3P9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.4■□□□□ 0.54
Slf1Q8R3P9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slf1Q8R3P9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.4■□□□□ 0.54
Slf1Q8R3P9 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Slf1Q8R3P9 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slf1Q8R3P9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slf1Q8R3P9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Slf1Q8R3P9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slf1Q8R3P9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Slf1Q8R3P9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Slf1Q8R3P9 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Slf1Q8R3P9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slf1Q8R3P9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slf1Q8R3P9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slf1Q8R3P9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slf1Q8R3P9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.39■□□□□ 0.53
Slf1Q8R3P9 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Slf1Q8R3P9 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Slf1Q8R3P9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Slf1Q8R3P9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slf1Q8R3P9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.39■□□□□ 0.53
Slf1Q8R3P9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Slf1Q8R3P9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slf1Q8R3P9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Slf1Q8R3P9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slf1Q8R3P9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Slf1Q8R3P9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.38■□□□□ 0.53
Slf1Q8R3P9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Slf1Q8R3P9 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
Slf1Q8R3P9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slf1Q8R3P9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.37■□□□□ 0.53
Slf1Q8R3P9 Spcs1-204ENSMUST00000226782 949 ntBASIC18.37■□□□□ 0.53
Slf1Q8R3P9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Slf1Q8R3P9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slf1Q8R3P9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slf1Q8R3P9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slf1Q8R3P9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slf1Q8R3P9 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slf1Q8R3P9 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slf1Q8R3P9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slf1Q8R3P9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Slf1Q8R3P9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Slf1Q8R3P9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Slf1Q8R3P9 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms