Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gtf3c5Q8R2T8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gtf3c5Q8R2T8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Gtf3c5Q8R2T8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gtf3c5Q8R2T8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Gtf3c5Q8R2T8 Gm26596-201ENSMUST00000180464 2655 ntBASIC21.32■■□□□ 1
Gtf3c5Q8R2T8 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gtf3c5Q8R2T8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gtf3c5Q8R2T8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.32■■□□□ 1
Gtf3c5Q8R2T8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Gtf3c5Q8R2T8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gtf3c5Q8R2T8 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC21.31■■□□□ 1
Gtf3c5Q8R2T8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gtf3c5Q8R2T8 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Gtf3c5Q8R2T8 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Gtf3c5Q8R2T8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gtf3c5Q8R2T8 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gtf3c5Q8R2T8 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gtf3c5Q8R2T8 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC21.31■■□□□ 1
Gtf3c5Q8R2T8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gtf3c5Q8R2T8 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.31■■□□□ 1
Gtf3c5Q8R2T8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Gtf3c5Q8R2T8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC21.31■■□□□ 1
Gtf3c5Q8R2T8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gtf3c5Q8R2T8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Gtf3c5Q8R2T8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gtf3c5Q8R2T8 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Gtf3c5Q8R2T8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Gtf3c5Q8R2T8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC21.3■■□□□ 1
Gtf3c5Q8R2T8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Gtf3c5Q8R2T8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gtf3c5Q8R2T8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Gtf3c5Q8R2T8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Gtf3c5Q8R2T8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.3■■□□□ 1
Gtf3c5Q8R2T8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gtf3c5Q8R2T8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gtf3c5Q8R2T8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gtf3c5Q8R2T8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.3■■□□□ 1
Gtf3c5Q8R2T8 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gtf3c5Q8R2T8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gtf3c5Q8R2T8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gtf3c5Q8R2T8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Gtf3c5Q8R2T8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Gtf3c5Q8R2T8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Gtf3c5Q8R2T8 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Gtf3c5Q8R2T8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
Gtf3c5Q8R2T8 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.29■■□□□ 1
Gtf3c5Q8R2T8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gtf3c5Q8R2T8 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC21.29■■□□□ 1
Gtf3c5Q8R2T8 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Gtf3c5Q8R2T8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.29■■□□□ 1
Gtf3c5Q8R2T8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Gtf3c5Q8R2T8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gtf3c5Q8R2T8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Gtf3c5Q8R2T8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.29■■□□□ 1
Gtf3c5Q8R2T8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Gtf3c5Q8R2T8 Gm4968-201ENSMUST00000071458 858 ntBASIC21.29■■□□□ 1
Gtf3c5Q8R2T8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Gtf3c5Q8R2T8 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gtf3c5Q8R2T8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.28■■□□□ 1
Gtf3c5Q8R2T8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gtf3c5Q8R2T8 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Gtf3c5Q8R2T8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.28■■□□□ 1
Gtf3c5Q8R2T8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.28■■□□□ 1
Gtf3c5Q8R2T8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Gtf3c5Q8R2T8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gtf3c5Q8R2T8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.28■■□□□ 1
Gtf3c5Q8R2T8 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.28■■□□□ 1
Gtf3c5Q8R2T8 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Gtf3c5Q8R2T8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gtf3c5Q8R2T8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Gtf3c5Q8R2T8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gtf3c5Q8R2T8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gtf3c5Q8R2T8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Gtf3c5Q8R2T8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Gtf3c5Q8R2T8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.27■■□□□ 1
Gtf3c5Q8R2T8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.27■■□□□ 1
Gtf3c5Q8R2T8 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.27■■□□□ 1
Gtf3c5Q8R2T8 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gtf3c5Q8R2T8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Gtf3c5Q8R2T8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.27■□□□□ 0.99
Gtf3c5Q8R2T8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Gtf3c5Q8R2T8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Gtf3c5Q8R2T8 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Gtf3c5Q8R2T8 Gm10710-201ENSMUST00000047876 3971 ntBASIC21.27■□□□□ 0.99
Gtf3c5Q8R2T8 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Gtf3c5Q8R2T8 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c5Q8R2T8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC21.26■□□□□ 0.99
Gtf3c5Q8R2T8 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.26■□□□□ 0.99
Gtf3c5Q8R2T8 Gm5408-201ENSMUST00000197998 747 ntBASIC21.26■□□□□ 0.99
Gtf3c5Q8R2T8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c5Q8R2T8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c5Q8R2T8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c5Q8R2T8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c5Q8R2T8 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c5Q8R2T8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Gtf3c5Q8R2T8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf3c5Q8R2T8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf3c5Q8R2T8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Gtf3c5Q8R2T8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms