Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm43799-201ENSMUST00000201845 579 ntBASIC23.43■■□□□ 1.34
Chmp7Q8R1T1 Gm16042-201ENSMUST00000204813 1247 ntBASIC23.43■■□□□ 1.34
Chmp7Q8R1T1 AC121577.1-201ENSMUST00000227302 707 ntBASIC23.43■■□□□ 1.34
Chmp7Q8R1T1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Chmp7Q8R1T1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Chmp7Q8R1T1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Chmp7Q8R1T1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC23.42■■□□□ 1.34
Chmp7Q8R1T1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Chmp7Q8R1T1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Chmp7Q8R1T1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Chmp7Q8R1T1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Chmp7Q8R1T1 Arhgef4-208ENSMUST00000211073 171 ntBASIC23.42■■□□□ 1.34
Chmp7Q8R1T1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC23.42■■□□□ 1.34
Chmp7Q8R1T1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Chmp7Q8R1T1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Chmp7Q8R1T1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC23.42■■□□□ 1.34
Chmp7Q8R1T1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Chmp7Q8R1T1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Chmp7Q8R1T1 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Chmp7Q8R1T1 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Chmp7Q8R1T1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Chmp7Q8R1T1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Chmp7Q8R1T1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Chmp7Q8R1T1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Chmp7Q8R1T1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Chmp7Q8R1T1 Gm6433-201ENSMUST00000118634 875 ntBASIC23.41■■□□□ 1.34
Chmp7Q8R1T1 Gm37292-201ENSMUST00000192062 758 ntBASIC23.41■■□□□ 1.34
Chmp7Q8R1T1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Chmp7Q8R1T1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
Chmp7Q8R1T1 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Chmp7Q8R1T1 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Chmp7Q8R1T1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Chmp7Q8R1T1 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Chmp7Q8R1T1 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Chmp7Q8R1T1 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Chmp7Q8R1T1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC23.4■■□□□ 1.34
Chmp7Q8R1T1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Chmp7Q8R1T1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Chmp7Q8R1T1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Chmp7Q8R1T1 Mir6349-201ENSMUST00000184059 97 ntBASIC23.4■■□□□ 1.34
Chmp7Q8R1T1 Gm21814-202ENSMUST00000203277 873 ntBASIC23.4■■□□□ 1.34
Chmp7Q8R1T1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Chmp7Q8R1T1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Chmp7Q8R1T1 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Chmp7Q8R1T1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC23.4■■□□□ 1.34
Chmp7Q8R1T1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Chmp7Q8R1T1 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
Chmp7Q8R1T1 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Chmp7Q8R1T1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Chmp7Q8R1T1 Gm12382-201ENSMUST00000122005 922 ntBASIC23.39■■□□□ 1.33
Chmp7Q8R1T1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC23.39■■□□□ 1.33
Chmp7Q8R1T1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Chmp7Q8R1T1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Chmp7Q8R1T1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC23.39■■□□□ 1.33
Chmp7Q8R1T1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Chmp7Q8R1T1 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Chmp7Q8R1T1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.33
Chmp7Q8R1T1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC23.39■■□□□ 1.33
Chmp7Q8R1T1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Chmp7Q8R1T1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Chmp7Q8R1T1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Chmp7Q8R1T1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Chmp7Q8R1T1 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Chmp7Q8R1T1 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Chmp7Q8R1T1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Chmp7Q8R1T1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Chmp7Q8R1T1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC23.38■■□□□ 1.33
Chmp7Q8R1T1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Chmp7Q8R1T1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Chmp7Q8R1T1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Chmp7Q8R1T1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC23.37■■□□□ 1.33
Chmp7Q8R1T1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Chmp7Q8R1T1 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Chmp7Q8R1T1 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Chmp7Q8R1T1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
Chmp7Q8R1T1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Chmp7Q8R1T1 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Chmp7Q8R1T1 Gm30025-201ENSMUST00000218555 728 ntBASIC23.37■■□□□ 1.33
Chmp7Q8R1T1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC23.37■■□□□ 1.33
Chmp7Q8R1T1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Chmp7Q8R1T1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Chmp7Q8R1T1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Chmp7Q8R1T1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Chmp7Q8R1T1 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Chmp7Q8R1T1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC23.36■■□□□ 1.33
Chmp7Q8R1T1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC23.36■■□□□ 1.33
Chmp7Q8R1T1 Gm44544-201ENSMUST00000207052 1844 ntBASIC23.36■■□□□ 1.33
Chmp7Q8R1T1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Chmp7Q8R1T1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC23.36■■□□□ 1.33
Chmp7Q8R1T1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Chmp7Q8R1T1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Chmp7Q8R1T1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Chmp7Q8R1T1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC23.35■■□□□ 1.33
Chmp7Q8R1T1 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Chmp7Q8R1T1 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Chmp7Q8R1T1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Chmp7Q8R1T1 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Chmp7Q8R1T1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Chmp7Q8R1T1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Chmp7Q8R1T1 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms