Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 Gm22325-201ENSMUST00000158904 308 ntBASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 Gm27275-201ENSMUST00000184318 272 ntBASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Tm6sf2Q8R1J1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 Golph3-205ENSMUST00000228671 2842 ntBASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 Gm2399-201ENSMUST00000104944 225 ntBASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 Gm37856-201ENSMUST00000191634 999 ntBASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Tm6sf2Q8R1J1 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tm6sf2Q8R1J1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Tm6sf2Q8R1J1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tm6sf2Q8R1J1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tm6sf2Q8R1J1 Trmt13-210ENSMUST00000198454 880 ntBASIC17.14■□□□□ 0.33
Tm6sf2Q8R1J1 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.14■□□□□ 0.33
Tm6sf2Q8R1J1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tm6sf2Q8R1J1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Tm6sf2Q8R1J1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Tm6sf2Q8R1J1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Tm6sf2Q8R1J1 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.14■□□□□ 0.33
Tm6sf2Q8R1J1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tm6sf2Q8R1J1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tm6sf2Q8R1J1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tm6sf2Q8R1J1 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tm6sf2Q8R1J1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.13■□□□□ 0.33
Tm6sf2Q8R1J1 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tm6sf2Q8R1J1 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tm6sf2Q8R1J1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tm6sf2Q8R1J1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tm6sf2Q8R1J1 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Tm6sf2Q8R1J1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Tm6sf2Q8R1J1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tm6sf2Q8R1J1 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tm6sf2Q8R1J1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tm6sf2Q8R1J1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tm6sf2Q8R1J1 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.13■□□□□ 0.33
Tm6sf2Q8R1J1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tm6sf2Q8R1J1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tm6sf2Q8R1J1 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Tm6sf2Q8R1J1 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.13■□□□□ 0.33
Tm6sf2Q8R1J1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.12■□□□□ 0.33
Tm6sf2Q8R1J1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tm6sf2Q8R1J1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tm6sf2Q8R1J1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tm6sf2Q8R1J1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tm6sf2Q8R1J1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tm6sf2Q8R1J1 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.12■□□□□ 0.33
Tm6sf2Q8R1J1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tm6sf2Q8R1J1 Gm20760-201ENSMUST00000179197 648 ntBASIC17.12■□□□□ 0.33
Tm6sf2Q8R1J1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tm6sf2Q8R1J1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tm6sf2Q8R1J1 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tm6sf2Q8R1J1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Tm6sf2Q8R1J1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tm6sf2Q8R1J1 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.12■□□□□ 0.33
Tm6sf2Q8R1J1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Tm6sf2Q8R1J1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Tm6sf2Q8R1J1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.12■□□□□ 0.33
Tm6sf2Q8R1J1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tm6sf2Q8R1J1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Tm6sf2Q8R1J1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tm6sf2Q8R1J1 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tm6sf2Q8R1J1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tm6sf2Q8R1J1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tm6sf2Q8R1J1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tm6sf2Q8R1J1 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms