Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn1Q8K445 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn1Q8K445 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Clrn1Q8K445 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn1Q8K445 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn1Q8K445 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Clrn1Q8K445 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn1Q8K445 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn1Q8K445 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.25■□□□□ 0.35
Clrn1Q8K445 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.25■□□□□ 0.35
Clrn1Q8K445 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn1Q8K445 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn1Q8K445 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clrn1Q8K445 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clrn1Q8K445 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clrn1Q8K445 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clrn1Q8K445 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Clrn1Q8K445 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.24■□□□□ 0.35
Clrn1Q8K445 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.24■□□□□ 0.35
Clrn1Q8K445 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clrn1Q8K445 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.24■□□□□ 0.35
Clrn1Q8K445 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clrn1Q8K445 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.24■□□□□ 0.35
Clrn1Q8K445 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clrn1Q8K445 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clrn1Q8K445 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clrn1Q8K445 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Clrn1Q8K445 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clrn1Q8K445 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clrn1Q8K445 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Clrn1Q8K445 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.24■□□□□ 0.35
Clrn1Q8K445 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clrn1Q8K445 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.24■□□□□ 0.35
Clrn1Q8K445 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Clrn1Q8K445 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clrn1Q8K445 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Clrn1Q8K445 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clrn1Q8K445 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clrn1Q8K445 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.23■□□□□ 0.35
Clrn1Q8K445 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.23■□□□□ 0.35
Clrn1Q8K445 Gm37179-201ENSMUST00000194862 823 ntBASIC17.23■□□□□ 0.35
Clrn1Q8K445 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.23■□□□□ 0.35
Clrn1Q8K445 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Clrn1Q8K445 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.23■□□□□ 0.35
Clrn1Q8K445 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn1Q8K445 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Clrn1Q8K445 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Clrn1Q8K445 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn1Q8K445 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn1Q8K445 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.22■□□□□ 0.35
Clrn1Q8K445 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn1Q8K445 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn1Q8K445 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn1Q8K445 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Clrn1Q8K445 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn1Q8K445 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.22■□□□□ 0.35
Clrn1Q8K445 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn1Q8K445 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn1Q8K445 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Clrn1Q8K445 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Clrn1Q8K445 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn1Q8K445 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Clrn1Q8K445 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn1Q8K445 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn1Q8K445 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn1Q8K445 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn1Q8K445 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn1Q8K445 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Clrn1Q8K445 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn1Q8K445 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.21■□□□□ 0.35
Clrn1Q8K445 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn1Q8K445 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Clrn1Q8K445 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn1Q8K445 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn1Q8K445 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn1Q8K445 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Clrn1Q8K445 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.21■□□□□ 0.35
Clrn1Q8K445 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Clrn1Q8K445 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.21■□□□□ 0.34
Clrn1Q8K445 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Clrn1Q8K445 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn1Q8K445 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn1Q8K445 Gm7290-201ENSMUST00000104990 617 ntBASIC17.2■□□□□ 0.34
Clrn1Q8K445 Gm12918-201ENSMUST00000120234 636 ntBASIC17.2■□□□□ 0.34
Clrn1Q8K445 Gm15710-201ENSMUST00000121821 636 ntBASIC17.2■□□□□ 0.34
Clrn1Q8K445 Gm5075-201ENSMUST00000196916 622 ntBASIC17.2■□□□□ 0.34
Clrn1Q8K445 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn1Q8K445 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.2■□□□□ 0.34
Clrn1Q8K445 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.2■□□□□ 0.34
Clrn1Q8K445 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn1Q8K445 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn1Q8K445 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn1Q8K445 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn1Q8K445 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn1Q8K445 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn1Q8K445 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Clrn1Q8K445 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn1Q8K445 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Clrn1Q8K445 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.19■□□□□ 0.34
Clrn1Q8K445 Mir5133-201ENSMUST00000174955 77 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms