Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Cchcr1Q8K2I2 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cchcr1Q8K2I2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cchcr1Q8K2I2 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cchcr1Q8K2I2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cchcr1Q8K2I2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Cchcr1Q8K2I2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.59■■□□□ 1.05
Cchcr1Q8K2I2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cchcr1Q8K2I2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.59■■□□□ 1.05
Cchcr1Q8K2I2 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cchcr1Q8K2I2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.59■■□□□ 1.05
Cchcr1Q8K2I2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cchcr1Q8K2I2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cchcr1Q8K2I2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cchcr1Q8K2I2 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cchcr1Q8K2I2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cchcr1Q8K2I2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.59■■□□□ 1.05
Cchcr1Q8K2I2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cchcr1Q8K2I2 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cchcr1Q8K2I2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cchcr1Q8K2I2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cchcr1Q8K2I2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cchcr1Q8K2I2 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cchcr1Q8K2I2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cchcr1Q8K2I2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cchcr1Q8K2I2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cchcr1Q8K2I2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cchcr1Q8K2I2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cchcr1Q8K2I2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cchcr1Q8K2I2 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cchcr1Q8K2I2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.04
Cchcr1Q8K2I2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cchcr1Q8K2I2 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cchcr1Q8K2I2 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cchcr1Q8K2I2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cchcr1Q8K2I2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Cchcr1Q8K2I2 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cchcr1Q8K2I2 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cchcr1Q8K2I2 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC21.57■■□□□ 1.04
Cchcr1Q8K2I2 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Cchcr1Q8K2I2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.57■■□□□ 1.04
Cchcr1Q8K2I2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cchcr1Q8K2I2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cchcr1Q8K2I2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Cchcr1Q8K2I2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Cchcr1Q8K2I2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cchcr1Q8K2I2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Cchcr1Q8K2I2 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.57■■□□□ 1.04
Cchcr1Q8K2I2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cchcr1Q8K2I2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cchcr1Q8K2I2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cchcr1Q8K2I2 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cchcr1Q8K2I2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Cchcr1Q8K2I2 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Cchcr1Q8K2I2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cchcr1Q8K2I2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.56■■□□□ 1.04
Cchcr1Q8K2I2 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Cchcr1Q8K2I2 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.56■■□□□ 1.04
Cchcr1Q8K2I2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cchcr1Q8K2I2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cchcr1Q8K2I2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cchcr1Q8K2I2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cchcr1Q8K2I2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cchcr1Q8K2I2 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cchcr1Q8K2I2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.55■■□□□ 1.04
Cchcr1Q8K2I2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
Cchcr1Q8K2I2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cchcr1Q8K2I2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cchcr1Q8K2I2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Cchcr1Q8K2I2 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cchcr1Q8K2I2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Cchcr1Q8K2I2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cchcr1Q8K2I2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cchcr1Q8K2I2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cchcr1Q8K2I2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cchcr1Q8K2I2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Cchcr1Q8K2I2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cchcr1Q8K2I2 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Cchcr1Q8K2I2 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cchcr1Q8K2I2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cchcr1Q8K2I2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cchcr1Q8K2I2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cchcr1Q8K2I2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cchcr1Q8K2I2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Cchcr1Q8K2I2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cchcr1Q8K2I2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cchcr1Q8K2I2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cchcr1Q8K2I2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
Cchcr1Q8K2I2 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cchcr1Q8K2I2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cchcr1Q8K2I2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cchcr1Q8K2I2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cchcr1Q8K2I2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Cchcr1Q8K2I2 Tgds-204ENSMUST00000228543 1594 ntBASIC21.53■■□□□ 1.04
Cchcr1Q8K2I2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cchcr1Q8K2I2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cchcr1Q8K2I2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC21.52■■□□□ 1.04
Cchcr1Q8K2I2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cchcr1Q8K2I2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cchcr1Q8K2I2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms