Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4rl1Q8K0S5 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4rl1Q8K0S5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4rl1Q8K0S5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4rl1Q8K0S5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4rl1Q8K0S5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4rl1Q8K0S5 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rtn4rl1Q8K0S5 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rtn4rl1Q8K0S5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn4rl1Q8K0S5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn4rl1Q8K0S5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn4rl1Q8K0S5 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn4rl1Q8K0S5 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn4rl1Q8K0S5 Gm21362-201ENSMUST00000194272 928 ntBASIC18.55■□□□□ 0.56
Rtn4rl1Q8K0S5 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn4rl1Q8K0S5 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn4rl1Q8K0S5 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.55■□□□□ 0.56
Rtn4rl1Q8K0S5 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.55■□□□□ 0.56
Rtn4rl1Q8K0S5 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn4rl1Q8K0S5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rtn4rl1Q8K0S5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtn4rl1Q8K0S5 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rtn4rl1Q8K0S5 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtn4rl1Q8K0S5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.54■□□□□ 0.56
Rtn4rl1Q8K0S5 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtn4rl1Q8K0S5 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rtn4rl1Q8K0S5 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Rtn4rl1Q8K0S5 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.54■□□□□ 0.56
Rtn4rl1Q8K0S5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Rtn4rl1Q8K0S5 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Rtn4rl1Q8K0S5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rtn4rl1Q8K0S5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rtn4rl1Q8K0S5 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rtn4rl1Q8K0S5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn4rl1Q8K0S5 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn4rl1Q8K0S5 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn4rl1Q8K0S5 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn4rl1Q8K0S5 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.53■□□□□ 0.56
Rtn4rl1Q8K0S5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn4rl1Q8K0S5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn4rl1Q8K0S5 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn4rl1Q8K0S5 Gm10819-201ENSMUST00000099988 561 ntBASIC18.53■□□□□ 0.56
Rtn4rl1Q8K0S5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn4rl1Q8K0S5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rtn4rl1Q8K0S5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtn4rl1Q8K0S5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Rtn4rl1Q8K0S5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Rtn4rl1Q8K0S5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtn4rl1Q8K0S5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC18.52■□□□□ 0.56
Rtn4rl1Q8K0S5 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rtn4rl1Q8K0S5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.52■□□□□ 0.56
Rtn4rl1Q8K0S5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Rtn4rl1Q8K0S5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtn4rl1Q8K0S5 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtn4rl1Q8K0S5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtn4rl1Q8K0S5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rtn4rl1Q8K0S5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rtn4rl1Q8K0S5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rtn4rl1Q8K0S5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rtn4rl1Q8K0S5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rtn4rl1Q8K0S5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4rl1Q8K0S5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4rl1Q8K0S5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rtn4rl1Q8K0S5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rtn4rl1Q8K0S5 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4rl1Q8K0S5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.51■□□□□ 0.55
Rtn4rl1Q8K0S5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rtn4rl1Q8K0S5 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.51■□□□□ 0.55
Rtn4rl1Q8K0S5 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.51■□□□□ 0.55
Rtn4rl1Q8K0S5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.51■□□□□ 0.55
Rtn4rl1Q8K0S5 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.51■□□□□ 0.55
Rtn4rl1Q8K0S5 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4rl1Q8K0S5 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4rl1Q8K0S5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4rl1Q8K0S5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4rl1Q8K0S5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Rtn4rl1Q8K0S5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.51■□□□□ 0.55
Rtn4rl1Q8K0S5 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4rl1Q8K0S5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rtn4rl1Q8K0S5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Rtn4rl1Q8K0S5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4rl1Q8K0S5 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rtn4rl1Q8K0S5 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4rl1Q8K0S5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4rl1Q8K0S5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4rl1Q8K0S5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4rl1Q8K0S5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4rl1Q8K0S5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC18.5■□□□□ 0.55
Rtn4rl1Q8K0S5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4rl1Q8K0S5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4rl1Q8K0S5 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rtn4rl1Q8K0S5 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4rl1Q8K0S5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4rl1Q8K0S5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4rl1Q8K0S5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4rl1Q8K0S5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4rl1Q8K0S5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4rl1Q8K0S5 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.49■□□□□ 0.55
Rtn4rl1Q8K0S5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rtn4rl1Q8K0S5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms