Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CroccQ8CJ40 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CroccQ8CJ40 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CroccQ8CJ40 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CroccQ8CJ40 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.48■□□□□ 0.39
CroccQ8CJ40 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CroccQ8CJ40 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CroccQ8CJ40 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CroccQ8CJ40 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CroccQ8CJ40 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CroccQ8CJ40 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
CroccQ8CJ40 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CroccQ8CJ40 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CroccQ8CJ40 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CroccQ8CJ40 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CroccQ8CJ40 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CroccQ8CJ40 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CroccQ8CJ40 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CroccQ8CJ40 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CroccQ8CJ40 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CroccQ8CJ40 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CroccQ8CJ40 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.47■□□□□ 0.39
CroccQ8CJ40 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CroccQ8CJ40 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CroccQ8CJ40 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CroccQ8CJ40 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.47■□□□□ 0.39
CroccQ8CJ40 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CroccQ8CJ40 Gm12933-201ENSMUST00000120203 872 ntBASIC17.47■□□□□ 0.39
CroccQ8CJ40 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
CroccQ8CJ40 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
CroccQ8CJ40 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.46■□□□□ 0.39
CroccQ8CJ40 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CroccQ8CJ40 Tgds-204ENSMUST00000228543 1594 ntBASIC17.46■□□□□ 0.39
CroccQ8CJ40 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CroccQ8CJ40 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CroccQ8CJ40 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CroccQ8CJ40 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CroccQ8CJ40 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CroccQ8CJ40 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CroccQ8CJ40 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CroccQ8CJ40 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CroccQ8CJ40 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CroccQ8CJ40 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CroccQ8CJ40 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CroccQ8CJ40 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CroccQ8CJ40 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.45■□□□□ 0.38
CroccQ8CJ40 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CroccQ8CJ40 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CroccQ8CJ40 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CroccQ8CJ40 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CroccQ8CJ40 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CroccQ8CJ40 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CroccQ8CJ40 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Gm2399-201ENSMUST00000104944 225 ntBASIC17.44■□□□□ 0.38
CroccQ8CJ40 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CroccQ8CJ40 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CroccQ8CJ40 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CroccQ8CJ40 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.43■□□□□ 0.38
CroccQ8CJ40 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.43■□□□□ 0.38
CroccQ8CJ40 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.43■□□□□ 0.38
CroccQ8CJ40 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CroccQ8CJ40 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.43■□□□□ 0.38
CroccQ8CJ40 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CroccQ8CJ40 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CroccQ8CJ40 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CroccQ8CJ40 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CroccQ8CJ40 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CroccQ8CJ40 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CroccQ8CJ40 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CroccQ8CJ40 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.43■□□□□ 0.38
CroccQ8CJ40 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CroccQ8CJ40 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CroccQ8CJ40 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
CroccQ8CJ40 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.43■□□□□ 0.38
CroccQ8CJ40 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CroccQ8CJ40 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CroccQ8CJ40 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
CroccQ8CJ40 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CroccQ8CJ40 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CroccQ8CJ40 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CroccQ8CJ40 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms