Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rfwd3Q8CIK8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfwd3Q8CIK8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfwd3Q8CIK8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfwd3Q8CIK8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Gm6211-202ENSMUST00000167849 925 ntBASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Golph3-205ENSMUST00000228671 2842 ntBASIC17.16■□□□□ 0.34
Rfwd3Q8CIK8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.15■□□□□ 0.34
Rfwd3Q8CIK8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.15■□□□□ 0.34
Rfwd3Q8CIK8 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfwd3Q8CIK8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.15■□□□□ 0.34
Rfwd3Q8CIK8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfwd3Q8CIK8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rfwd3Q8CIK8 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfwd3Q8CIK8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfwd3Q8CIK8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rfwd3Q8CIK8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rfwd3Q8CIK8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rfwd3Q8CIK8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Rfwd3Q8CIK8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfwd3Q8CIK8 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfwd3Q8CIK8 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfwd3Q8CIK8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Rfwd3Q8CIK8 Gm13148-201ENSMUST00000118892 745 ntBASIC17.14■□□□□ 0.33
Rfwd3Q8CIK8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.14■□□□□ 0.33
Rfwd3Q8CIK8 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.14■□□□□ 0.33
Rfwd3Q8CIK8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfwd3Q8CIK8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.14■□□□□ 0.33
Rfwd3Q8CIK8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rfwd3Q8CIK8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfwd3Q8CIK8 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.14■□□□□ 0.33
Rfwd3Q8CIK8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfwd3Q8CIK8 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfwd3Q8CIK8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rfwd3Q8CIK8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfwd3Q8CIK8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfwd3Q8CIK8 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfwd3Q8CIK8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rfwd3Q8CIK8 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Rfwd3Q8CIK8 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.13■□□□□ 0.33
Rfwd3Q8CIK8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfwd3Q8CIK8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfwd3Q8CIK8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfwd3Q8CIK8 Gm10602-201ENSMUST00000098239 609 ntBASIC17.13■□□□□ 0.33
Rfwd3Q8CIK8 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfwd3Q8CIK8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rfwd3Q8CIK8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rfwd3Q8CIK8 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Rfwd3Q8CIK8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfwd3Q8CIK8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfwd3Q8CIK8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfwd3Q8CIK8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rfwd3Q8CIK8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rfwd3Q8CIK8 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rfwd3Q8CIK8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfwd3Q8CIK8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfwd3Q8CIK8 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rfwd3Q8CIK8 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfwd3Q8CIK8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rfwd3Q8CIK8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rfwd3Q8CIK8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfwd3Q8CIK8 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rfwd3Q8CIK8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rfwd3Q8CIK8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfwd3Q8CIK8 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.12■□□□□ 0.33
Rfwd3Q8CIK8 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.12■□□□□ 0.33
Rfwd3Q8CIK8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfwd3Q8CIK8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.12■□□□□ 0.33
Rfwd3Q8CIK8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rfwd3Q8CIK8 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rfwd3Q8CIK8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms