Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zc3h3Q8CHP0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.95■□□□□ 0.46
Zc3h3Q8CHP0 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Zc3h3Q8CHP0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Zc3h3Q8CHP0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Zc3h3Q8CHP0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Zc3h3Q8CHP0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Zc3h3Q8CHP0 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.94■□□□□ 0.46
Zc3h3Q8CHP0 Gm6443-201ENSMUST00000203599 874 ntBASIC17.94■□□□□ 0.46
Zc3h3Q8CHP0 Mzt1-203ENSMUST00000227948 952 ntBASIC17.94■□□□□ 0.46
Zc3h3Q8CHP0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Zc3h3Q8CHP0 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Zc3h3Q8CHP0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Zc3h3Q8CHP0 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Zc3h3Q8CHP0 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zc3h3Q8CHP0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Zc3h3Q8CHP0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.93■□□□□ 0.46
Zc3h3Q8CHP0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zc3h3Q8CHP0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.93■□□□□ 0.46
Zc3h3Q8CHP0 Gm5587-201ENSMUST00000206270 674 ntBASIC17.93■□□□□ 0.46
Zc3h3Q8CHP0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.93■□□□□ 0.46
Zc3h3Q8CHP0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Zc3h3Q8CHP0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zc3h3Q8CHP0 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zc3h3Q8CHP0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zc3h3Q8CHP0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Zc3h3Q8CHP0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.92■□□□□ 0.46
Zc3h3Q8CHP0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Zc3h3Q8CHP0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.92■□□□□ 0.46
Zc3h3Q8CHP0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zc3h3Q8CHP0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Zc3h3Q8CHP0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zc3h3Q8CHP0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Zc3h3Q8CHP0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Zc3h3Q8CHP0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Zc3h3Q8CHP0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zc3h3Q8CHP0 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.91■□□□□ 0.46
Zc3h3Q8CHP0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zc3h3Q8CHP0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zc3h3Q8CHP0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.91■□□□□ 0.46
Zc3h3Q8CHP0 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zc3h3Q8CHP0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.91■□□□□ 0.46
Zc3h3Q8CHP0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.91■□□□□ 0.46
Zc3h3Q8CHP0 Gm29518-201ENSMUST00000190858 372 ntBASIC17.91■□□□□ 0.46
Zc3h3Q8CHP0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Zc3h3Q8CHP0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zc3h3Q8CHP0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zc3h3Q8CHP0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Zc3h3Q8CHP0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Zc3h3Q8CHP0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Zc3h3Q8CHP0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zc3h3Q8CHP0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zc3h3Q8CHP0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Zc3h3Q8CHP0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zc3h3Q8CHP0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zc3h3Q8CHP0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Zc3h3Q8CHP0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zc3h3Q8CHP0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.9■□□□□ 0.46
Zc3h3Q8CHP0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zc3h3Q8CHP0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zc3h3Q8CHP0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zc3h3Q8CHP0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zc3h3Q8CHP0 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Zc3h3Q8CHP0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Zc3h3Q8CHP0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.89■□□□□ 0.45
Zc3h3Q8CHP0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Zc3h3Q8CHP0 Gm18958-201ENSMUST00000174258 762 ntBASIC17.89■□□□□ 0.45
Zc3h3Q8CHP0 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.89■□□□□ 0.45
Zc3h3Q8CHP0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Zc3h3Q8CHP0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zc3h3Q8CHP0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Zc3h3Q8CHP0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zc3h3Q8CHP0 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Zc3h3Q8CHP0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.89■□□□□ 0.45
Zc3h3Q8CHP0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.89■□□□□ 0.45
Zc3h3Q8CHP0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zc3h3Q8CHP0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.88■□□□□ 0.45
Zc3h3Q8CHP0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.88■□□□□ 0.45
Zc3h3Q8CHP0 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zc3h3Q8CHP0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zc3h3Q8CHP0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Zc3h3Q8CHP0 Gm16061-201ENSMUST00000122167 857 ntBASIC17.88■□□□□ 0.45
Zc3h3Q8CHP0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Zc3h3Q8CHP0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Zc3h3Q8CHP0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.88■□□□□ 0.45
Zc3h3Q8CHP0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zc3h3Q8CHP0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Zc3h3Q8CHP0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Zc3h3Q8CHP0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Zc3h3Q8CHP0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Zc3h3Q8CHP0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.87■□□□□ 0.45
Zc3h3Q8CHP0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zc3h3Q8CHP0 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Zc3h3Q8CHP0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.87■□□□□ 0.45
Zc3h3Q8CHP0 Gm27389-201ENSMUST00000183622 195 ntBASIC17.87■□□□□ 0.45
Zc3h3Q8CHP0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.87■□□□□ 0.45
Zc3h3Q8CHP0 Gm21559-201ENSMUST00000220638 855 ntBASIC17.87■□□□□ 0.45
Zc3h3Q8CHP0 Gm8587-201ENSMUST00000076538 843 ntBASIC17.87■□□□□ 0.45
Zc3h3Q8CHP0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Zc3h3Q8CHP0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms