Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm5898-201ENSMUST00000121016 2071 ntBASIC22.64■■□□□ 1.22
Smc5Q8CG46 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Smc5Q8CG46 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Smc5Q8CG46 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Smc5Q8CG46 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC22.64■■□□□ 1.21
Smc5Q8CG46 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Smc5Q8CG46 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Smc5Q8CG46 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Smc5Q8CG46 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Smc5Q8CG46 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Smc5Q8CG46 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Smc5Q8CG46 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Smc5Q8CG46 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Smc5Q8CG46 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Smc5Q8CG46 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Smc5Q8CG46 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Smc5Q8CG46 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Smc5Q8CG46 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Smc5Q8CG46 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Smc5Q8CG46 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Smc5Q8CG46 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Smc5Q8CG46 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC22.63■■□□□ 1.21
Smc5Q8CG46 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Smc5Q8CG46 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Smc5Q8CG46 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Smc5Q8CG46 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Smc5Q8CG46 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Smc5Q8CG46 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Smc5Q8CG46 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC22.62■■□□□ 1.21
Smc5Q8CG46 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC22.62■■□□□ 1.21
Smc5Q8CG46 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.62■■□□□ 1.21
Smc5Q8CG46 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Smc5Q8CG46 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
Smc5Q8CG46 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Smc5Q8CG46 Gm38345-201ENSMUST00000192635 1748 ntBASIC22.62■■□□□ 1.21
Smc5Q8CG46 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Smc5Q8CG46 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Smc5Q8CG46 Gm37374-201ENSMUST00000194954 1829 ntBASIC22.61■■□□□ 1.21
Smc5Q8CG46 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
Smc5Q8CG46 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Smc5Q8CG46 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Smc5Q8CG46 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Smc5Q8CG46 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC22.61■■□□□ 1.21
Smc5Q8CG46 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Smc5Q8CG46 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Smc5Q8CG46 Gm9988-201ENSMUST00000069786 435 ntBASIC22.61■■□□□ 1.21
Smc5Q8CG46 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Smc5Q8CG46 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Smc5Q8CG46 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Smc5Q8CG46 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC22.6■■□□□ 1.21
Smc5Q8CG46 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Smc5Q8CG46 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC22.6■■□□□ 1.21
Smc5Q8CG46 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smc5Q8CG46 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Smc5Q8CG46 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smc5Q8CG46 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smc5Q8CG46 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Smc5Q8CG46 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22.6■■□□□ 1.21
Smc5Q8CG46 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Smc5Q8CG46 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smc5Q8CG46 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smc5Q8CG46 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smc5Q8CG46 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smc5Q8CG46 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smc5Q8CG46 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC22.6■■□□□ 1.21
Smc5Q8CG46 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Smc5Q8CG46 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Smc5Q8CG46 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Smc5Q8CG46 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Smc5Q8CG46 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Smc5Q8CG46 AC131586.2-201ENSMUST00000228370 1512 ntBASIC22.59■■□□□ 1.21
Smc5Q8CG46 Gm21168-201ENSMUST00000199646 1096 ntBASIC22.59■■□□□ 1.21
Smc5Q8CG46 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Smc5Q8CG46 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Smc5Q8CG46 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Smc5Q8CG46 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Smc5Q8CG46 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Smc5Q8CG46 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
Smc5Q8CG46 AC121598.2-201ENSMUST00000228376 2325 ntBASIC22.58■■□□□ 1.21
Smc5Q8CG46 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Smc5Q8CG46 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Smc5Q8CG46 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Smc5Q8CG46 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Smc5Q8CG46 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Smc5Q8CG46 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.58■■□□□ 1.21
Smc5Q8CG46 Gm8969-201ENSMUST00000199694 526 ntBASIC22.58■■□□□ 1.21
Smc5Q8CG46 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Smc5Q8CG46 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Smc5Q8CG46 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Smc5Q8CG46 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Smc5Q8CG46 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Smc5Q8CG46 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC22.58■■□□□ 1.2
Smc5Q8CG46 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Smc5Q8CG46 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Smc5Q8CG46 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Smc5Q8CG46 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Smc5Q8CG46 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC22.57■■□□□ 1.2
Smc5Q8CG46 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Smc5Q8CG46 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Smc5Q8CG46 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms