Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm5417-201ENSMUST00000079706 384 ntBASIC22.7■■□□□ 1.22
Trim52Q8CDV4 Gm9194-201ENSMUST00000220749 1447 ntBASIC22.7■■□□□ 1.22
Trim52Q8CDV4 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Trim52Q8CDV4 Gm38345-201ENSMUST00000192635 1748 ntBASIC22.7■■□□□ 1.22
Trim52Q8CDV4 Gm9885-202ENSMUST00000186234 2209 ntBASIC22.7■■□□□ 1.22
Trim52Q8CDV4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trim52Q8CDV4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trim52Q8CDV4 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trim52Q8CDV4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Trim52Q8CDV4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Trim52Q8CDV4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Trim52Q8CDV4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Trim52Q8CDV4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Trim52Q8CDV4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Trim52Q8CDV4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Trim52Q8CDV4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Trim52Q8CDV4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC22.69■■□□□ 1.22
Trim52Q8CDV4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim52Q8CDV4 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Trim52Q8CDV4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim52Q8CDV4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim52Q8CDV4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim52Q8CDV4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC22.68■■□□□ 1.22
Trim52Q8CDV4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Trim52Q8CDV4 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC22.68■■□□□ 1.22
Trim52Q8CDV4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC22.68■■□□□ 1.22
Trim52Q8CDV4 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim52Q8CDV4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim52Q8CDV4 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Trim52Q8CDV4 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Trim52Q8CDV4 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Trim52Q8CDV4 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim52Q8CDV4 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
Trim52Q8CDV4 Gm12382-201ENSMUST00000122005 922 ntBASIC22.67■■□□□ 1.22
Trim52Q8CDV4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC22.67■■□□□ 1.22
Trim52Q8CDV4 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim52Q8CDV4 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Trim52Q8CDV4 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim52Q8CDV4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC22.67■■□□□ 1.22
Trim52Q8CDV4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Trim52Q8CDV4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim52Q8CDV4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim52Q8CDV4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Trim52Q8CDV4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim52Q8CDV4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Trim52Q8CDV4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Trim52Q8CDV4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC22.66■■□□□ 1.22
Trim52Q8CDV4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Trim52Q8CDV4 Arhgef4-208ENSMUST00000211073 171 ntBASIC22.66■■□□□ 1.22
Trim52Q8CDV4 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim52Q8CDV4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Trim52Q8CDV4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Trim52Q8CDV4 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Trim52Q8CDV4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
Trim52Q8CDV4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim52Q8CDV4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Trim52Q8CDV4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trim52Q8CDV4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim52Q8CDV4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim52Q8CDV4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trim52Q8CDV4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Trim52Q8CDV4 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Trim52Q8CDV4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim52Q8CDV4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim52Q8CDV4 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim52Q8CDV4 Gm7712-202ENSMUST00000222331 1510 ntBASIC22.65■■□□□ 1.22
Trim52Q8CDV4 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trim52Q8CDV4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC22.64■■□□□ 1.22
Trim52Q8CDV4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Trim52Q8CDV4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Trim52Q8CDV4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim52Q8CDV4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC22.64■■□□□ 1.21
Trim52Q8CDV4 Odf3b-204ENSMUST00000227834 930 ntBASIC22.64■■□□□ 1.21
Trim52Q8CDV4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim52Q8CDV4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim52Q8CDV4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC22.64■■□□□ 1.21
Trim52Q8CDV4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Trim52Q8CDV4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Trim52Q8CDV4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC22.63■■□□□ 1.21
Trim52Q8CDV4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
Trim52Q8CDV4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim52Q8CDV4 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trim52Q8CDV4 Gm11643-201ENSMUST00000119578 864 ntBASIC22.63■■□□□ 1.21
Trim52Q8CDV4 Gm43799-201ENSMUST00000201845 579 ntBASIC22.63■■□□□ 1.21
Trim52Q8CDV4 AC153881.2-201ENSMUST00000214877 204 ntBASIC22.63■■□□□ 1.21
Trim52Q8CDV4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Trim52Q8CDV4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim52Q8CDV4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim52Q8CDV4 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Trim52Q8CDV4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim52Q8CDV4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim52Q8CDV4 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim52Q8CDV4 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC22.62■■□□□ 1.21
Trim52Q8CDV4 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trim52Q8CDV4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Trim52Q8CDV4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Trim52Q8CDV4 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Trim52Q8CDV4 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim52Q8CDV4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Trim52Q8CDV4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms