Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q8CD60 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Q8CD60 Rab3c-203ENSMUST00000224180 967 ntBASIC19.16■□□□□ 0.66
Q8CD60 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q8CD60 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q8CD60 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.16■□□□□ 0.66
Q8CD60 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q8CD60 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q8CD60 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Q8CD60 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q8CD60 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.15■□□□□ 0.66
Q8CD60 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC19.15■□□□□ 0.66
Q8CD60 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Q8CD60 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.15■□□□□ 0.66
Q8CD60 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.15■□□□□ 0.66
Q8CD60 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.15■□□□□ 0.66
Q8CD60 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q8CD60 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Q8CD60 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q8CD60 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q8CD60 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q8CD60 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Q8CD60 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Q8CD60 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Q8CD60 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Q8CD60 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Q8CD60 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Q8CD60 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Q8CD60 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Q8CD60 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Q8CD60 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
Q8CD60 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.14■□□□□ 0.65
Q8CD60 Fst-202ENSMUST00000223640 2612 ntBASIC19.14■□□□□ 0.65
Q8CD60 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Q8CD60 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Q8CD60 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC19.13■□□□□ 0.65
Q8CD60 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Q8CD60 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q8CD60 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.13■□□□□ 0.65
Q8CD60 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.13■□□□□ 0.65
Q8CD60 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q8CD60 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Q8CD60 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Q8CD60 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q8CD60 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Q8CD60 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Q8CD60 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q8CD60 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Q8CD60 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q8CD60 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q8CD60 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q8CD60 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q8CD60 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.12■□□□□ 0.65
Q8CD60 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Q8CD60 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q8CD60 Gm4968-201ENSMUST00000071458 858 ntBASIC19.12■□□□□ 0.65
Q8CD60 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q8CD60 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q8CD60 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.12■□□□□ 0.65
Q8CD60 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Q8CD60 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Q8CD60 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Q8CD60 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Q8CD60 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Q8CD60 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC19.11■□□□□ 0.65
Q8CD60 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.11■□□□□ 0.65
Q8CD60 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.11■□□□□ 0.65
Q8CD60 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.11■□□□□ 0.65
Q8CD60 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Q8CD60 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q8CD60 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q8CD60 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.11■□□□□ 0.65
Q8CD60 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Q8CD60 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Q8CD60 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Q8CD60 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Q8CD60 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Q8CD60 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q8CD60 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q8CD60 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q8CD60 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Q8CD60 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q8CD60 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q8CD60 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q8CD60 Gm44549-201ENSMUST00000208351 577 ntBASIC19.1■□□□□ 0.65
Q8CD60 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.1■□□□□ 0.65
Q8CD60 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.1■□□□□ 0.65
Q8CD60 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q8CD60 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Q8CD60 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q8CD60 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q8CD60 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q8CD60 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Q8CD60 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q8CD60 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Q8CD60 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Q8CD60 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Q8CD60 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Q8CD60 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Q8CD60 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms