Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shisa4Q8CA71 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Shisa4Q8CA71 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.35■■□□□ 1.01
Shisa4Q8CA71 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Shisa4Q8CA71 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shisa4Q8CA71 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shisa4Q8CA71 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Shisa4Q8CA71 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.34■■□□□ 1.01
Shisa4Q8CA71 Gm2559-201ENSMUST00000201323 363 ntBASIC21.34■■□□□ 1.01
Shisa4Q8CA71 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shisa4Q8CA71 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shisa4Q8CA71 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shisa4Q8CA71 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Shisa4Q8CA71 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Shisa4Q8CA71 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Shisa4Q8CA71 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Shisa4Q8CA71 Gm11927-201ENSMUST00000118472 759 ntBASIC21.33■■□□□ 1.01
Shisa4Q8CA71 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.33■■□□□ 1.01
Shisa4Q8CA71 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC21.33■■□□□ 1.01
Shisa4Q8CA71 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Shisa4Q8CA71 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Shisa4Q8CA71 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Shisa4Q8CA71 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Shisa4Q8CA71 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Shisa4Q8CA71 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.32■■□□□ 1
Shisa4Q8CA71 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Shisa4Q8CA71 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Shisa4Q8CA71 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Shisa4Q8CA71 Mtag2-201ENSMUST00000058665 714 ntBASIC21.32■■□□□ 1
Shisa4Q8CA71 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Shisa4Q8CA71 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Shisa4Q8CA71 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC21.32■■□□□ 1
Shisa4Q8CA71 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC21.32■■□□□ 1
Shisa4Q8CA71 Tgds-204ENSMUST00000228543 1594 ntBASIC21.31■■□□□ 1
Shisa4Q8CA71 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shisa4Q8CA71 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shisa4Q8CA71 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.31■■□□□ 1
Shisa4Q8CA71 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shisa4Q8CA71 Zfp783-201ENSMUST00000095946 670 ntBASIC21.31■■□□□ 1
Shisa4Q8CA71 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shisa4Q8CA71 Gm10812-201ENSMUST00000099864 546 ntBASIC21.31■■□□□ 1
Shisa4Q8CA71 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shisa4Q8CA71 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.31■■□□□ 1
Shisa4Q8CA71 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.31■■□□□ 1
Shisa4Q8CA71 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shisa4Q8CA71 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Shisa4Q8CA71 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.31■■□□□ 1
Shisa4Q8CA71 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shisa4Q8CA71 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
Shisa4Q8CA71 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Shisa4Q8CA71 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Shisa4Q8CA71 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.3■■□□□ 1
Shisa4Q8CA71 Mir6982-201ENSMUST00000184354 68 ntBASIC21.3■■□□□ 1
Shisa4Q8CA71 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shisa4Q8CA71 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shisa4Q8CA71 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC21.3■■□□□ 1
Shisa4Q8CA71 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Shisa4Q8CA71 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Shisa4Q8CA71 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shisa4Q8CA71 AC123834.2-201ENSMUST00000224038 2340 ntBASIC21.29■■□□□ 1
Shisa4Q8CA71 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.29■■□□□ 1
Shisa4Q8CA71 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shisa4Q8CA71 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Shisa4Q8CA71 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.29■■□□□ 1
Shisa4Q8CA71 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shisa4Q8CA71 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.29■■□□□ 1
Shisa4Q8CA71 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Shisa4Q8CA71 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Shisa4Q8CA71 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Shisa4Q8CA71 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shisa4Q8CA71 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shisa4Q8CA71 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shisa4Q8CA71 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shisa4Q8CA71 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.28■■□□□ 1
Shisa4Q8CA71 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.28■■□□□ 1
Shisa4Q8CA71 Gm38285-201ENSMUST00000192928 922 ntBASIC21.28■■□□□ 1
Shisa4Q8CA71 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC21.28■■□□□ 1
Shisa4Q8CA71 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.28■■□□□ 1
Shisa4Q8CA71 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.28■■□□□ 1
Shisa4Q8CA71 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shisa4Q8CA71 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shisa4Q8CA71 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Shisa4Q8CA71 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.28■■□□□ 1
Shisa4Q8CA71 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Shisa4Q8CA71 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Shisa4Q8CA71 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.27■■□□□ 1
Shisa4Q8CA71 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Shisa4Q8CA71 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.27■■□□□ 1
Shisa4Q8CA71 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.27■■□□□ 1
Shisa4Q8CA71 Trmt13-210ENSMUST00000198454 880 ntBASIC21.27■■□□□ 1
Shisa4Q8CA71 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.27■□□□□ 0.99
Shisa4Q8CA71 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Shisa4Q8CA71 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21.27■□□□□ 0.99
Shisa4Q8CA71 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.26■□□□□ 0.99
Shisa4Q8CA71 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shisa4Q8CA71 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shisa4Q8CA71 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shisa4Q8CA71 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.26■□□□□ 0.99
Shisa4Q8CA71 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Shisa4Q8CA71 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms