Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim9Q8C7M3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim9Q8C7M3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim9Q8C7M3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim9Q8C7M3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim9Q8C7M3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim9Q8C7M3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Trim9Q8C7M3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim9Q8C7M3 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim9Q8C7M3 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim9Q8C7M3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim9Q8C7M3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.16■□□□□ 0.82
Trim9Q8C7M3 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.16■□□□□ 0.82
Trim9Q8C7M3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim9Q8C7M3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim9Q8C7M3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.16■□□□□ 0.82
Trim9Q8C7M3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Trim9Q8C7M3 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC20.16■□□□□ 0.82
Trim9Q8C7M3 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim9Q8C7M3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim9Q8C7M3 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim9Q8C7M3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Trim9Q8C7M3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim9Q8C7M3 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim9Q8C7M3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim9Q8C7M3 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim9Q8C7M3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
Trim9Q8C7M3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim9Q8C7M3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim9Q8C7M3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Trim9Q8C7M3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Trim9Q8C7M3 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Trim9Q8C7M3 Gm37179-201ENSMUST00000194862 823 ntBASIC20.15■□□□□ 0.82
Trim9Q8C7M3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Trim9Q8C7M3 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim9Q8C7M3 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim9Q8C7M3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Trim9Q8C7M3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim9Q8C7M3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim9Q8C7M3 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.15■□□□□ 0.82
Trim9Q8C7M3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim9Q8C7M3 Dmtn-207ENSMUST00000228001 2437 ntBASIC20.15■□□□□ 0.82
Trim9Q8C7M3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim9Q8C7M3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim9Q8C7M3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
Trim9Q8C7M3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trim9Q8C7M3 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trim9Q8C7M3 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim9Q8C7M3 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Trim9Q8C7M3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.14■□□□□ 0.81
Trim9Q8C7M3 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.14■□□□□ 0.81
Trim9Q8C7M3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim9Q8C7M3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim9Q8C7M3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim9Q8C7M3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.14■□□□□ 0.81
Trim9Q8C7M3 Gm13148-201ENSMUST00000118892 745 ntBASIC20.14■□□□□ 0.81
Trim9Q8C7M3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trim9Q8C7M3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Trim9Q8C7M3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim9Q8C7M3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim9Q8C7M3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Trim9Q8C7M3 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim9Q8C7M3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim9Q8C7M3 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim9Q8C7M3 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim9Q8C7M3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim9Q8C7M3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.13■□□□□ 0.81
Trim9Q8C7M3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim9Q8C7M3 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Trim9Q8C7M3 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim9Q8C7M3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim9Q8C7M3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim9Q8C7M3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim9Q8C7M3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim9Q8C7M3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.12■□□□□ 0.81
Trim9Q8C7M3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.12■□□□□ 0.81
Trim9Q8C7M3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim9Q8C7M3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim9Q8C7M3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim9Q8C7M3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim9Q8C7M3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim9Q8C7M3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim9Q8C7M3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim9Q8C7M3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim9Q8C7M3 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim9Q8C7M3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim9Q8C7M3 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim9Q8C7M3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trim9Q8C7M3 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.11■□□□□ 0.81
Trim9Q8C7M3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim9Q8C7M3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim9Q8C7M3 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim9Q8C7M3 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim9Q8C7M3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Trim9Q8C7M3 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Trim9Q8C7M3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Trim9Q8C7M3 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.1■□□□□ 0.81
Trim9Q8C7M3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.1■□□□□ 0.81
Trim9Q8C7M3 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.1■□□□□ 0.81
Trim9Q8C7M3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms