Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap54Q8C6S9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cfap54Q8C6S9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap54Q8C6S9 Gm37292-201ENSMUST00000192062 758 ntBASIC17.63■□□□□ 0.41
Cfap54Q8C6S9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap54Q8C6S9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap54Q8C6S9 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cfap54Q8C6S9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap54Q8C6S9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap54Q8C6S9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap54Q8C6S9 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.62■□□□□ 0.41
Cfap54Q8C6S9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Cfap54Q8C6S9 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap54Q8C6S9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap54Q8C6S9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap54Q8C6S9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.62■□□□□ 0.41
Cfap54Q8C6S9 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Cfap54Q8C6S9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap54Q8C6S9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Cfap54Q8C6S9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap54Q8C6S9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap54Q8C6S9 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap54Q8C6S9 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cfap54Q8C6S9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cfap54Q8C6S9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cfap54Q8C6S9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cfap54Q8C6S9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cfap54Q8C6S9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.61■□□□□ 0.41
Cfap54Q8C6S9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cfap54Q8C6S9 Gm10138-203ENSMUST00000206952 366 ntBASIC17.61■□□□□ 0.41
Cfap54Q8C6S9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cfap54Q8C6S9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cfap54Q8C6S9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cfap54Q8C6S9 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Cfap54Q8C6S9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cfap54Q8C6S9 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cfap54Q8C6S9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Cfap54Q8C6S9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cfap54Q8C6S9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cfap54Q8C6S9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.6■□□□□ 0.41
Cfap54Q8C6S9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cfap54Q8C6S9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cfap54Q8C6S9 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cfap54Q8C6S9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cfap54Q8C6S9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Cfap54Q8C6S9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cfap54Q8C6S9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.59■□□□□ 0.41
Cfap54Q8C6S9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cfap54Q8C6S9 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cfap54Q8C6S9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cfap54Q8C6S9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Cfap54Q8C6S9 Gm44771-201ENSMUST00000206975 626 ntBASIC17.59■□□□□ 0.41
Cfap54Q8C6S9 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.59■□□□□ 0.41
Cfap54Q8C6S9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.59■□□□□ 0.41
Cfap54Q8C6S9 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.59■□□□□ 0.41
Cfap54Q8C6S9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.59■□□□□ 0.41
Cfap54Q8C6S9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cfap54Q8C6S9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cfap54Q8C6S9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cfap54Q8C6S9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Cfap54Q8C6S9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cfap54Q8C6S9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Cfap54Q8C6S9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap54Q8C6S9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.58■□□□□ 0.4
Cfap54Q8C6S9 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap54Q8C6S9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.58■□□□□ 0.4
Cfap54Q8C6S9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap54Q8C6S9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.58■□□□□ 0.4
Cfap54Q8C6S9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.58■□□□□ 0.4
Cfap54Q8C6S9 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.58■□□□□ 0.4
Cfap54Q8C6S9 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.58■□□□□ 0.4
Cfap54Q8C6S9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap54Q8C6S9 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap54Q8C6S9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cfap54Q8C6S9 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.58■□□□□ 0.4
Cfap54Q8C6S9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Cfap54Q8C6S9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cfap54Q8C6S9 Gm14859-201ENSMUST00000117752 357 ntBASIC17.57■□□□□ 0.4
Cfap54Q8C6S9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.57■□□□□ 0.4
Cfap54Q8C6S9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cfap54Q8C6S9 Gm45058-201ENSMUST00000205810 766 ntBASIC17.57■□□□□ 0.4
Cfap54Q8C6S9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cfap54Q8C6S9 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cfap54Q8C6S9 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.57■□□□□ 0.4
Cfap54Q8C6S9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cfap54Q8C6S9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cfap54Q8C6S9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.57■□□□□ 0.4
Cfap54Q8C6S9 Gm12382-201ENSMUST00000122005 922 ntBASIC17.56■□□□□ 0.4
Cfap54Q8C6S9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.56■□□□□ 0.4
Cfap54Q8C6S9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap54Q8C6S9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap54Q8C6S9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap54Q8C6S9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap54Q8C6S9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap54Q8C6S9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Cfap54Q8C6S9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap54Q8C6S9 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.56■□□□□ 0.4
Cfap54Q8C6S9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap54Q8C6S9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cfap54Q8C6S9 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms