Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.27■□□□□ 0.04
Tsen54Q8C2A2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.27■□□□□ 0.04
Tsen54Q8C2A2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.27■□□□□ 0.04
Tsen54Q8C2A2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tsen54Q8C2A2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tsen54Q8C2A2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tsen54Q8C2A2 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tsen54Q8C2A2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Tsen54Q8C2A2 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Tsen54Q8C2A2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Fcho2-208ENSMUST00000224992 2964 ntBASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Gm45417-201ENSMUST00000209533 758 ntBASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tsen54Q8C2A2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 AA386476-201ENSMUST00000098781 1665 ntBASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tsen54Q8C2A2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tsen54Q8C2A2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tsen54Q8C2A2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tsen54Q8C2A2 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tsen54Q8C2A2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tsen54Q8C2A2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tsen54Q8C2A2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tsen54Q8C2A2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tsen54Q8C2A2 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tsen54Q8C2A2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tsen54Q8C2A2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tsen54Q8C2A2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tsen54Q8C2A2 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tsen54Q8C2A2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tsen54Q8C2A2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Tsen54Q8C2A2 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.23■□□□□ 0.03
Tsen54Q8C2A2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tsen54Q8C2A2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tsen54Q8C2A2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tsen54Q8C2A2 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tsen54Q8C2A2 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Tsen54Q8C2A2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tsen54Q8C2A2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tsen54Q8C2A2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tsen54Q8C2A2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tsen54Q8C2A2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.23■□□□□ 0.03
Tsen54Q8C2A2 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.23■□□□□ 0.03
Tsen54Q8C2A2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tsen54Q8C2A2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tsen54Q8C2A2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tsen54Q8C2A2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tsen54Q8C2A2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tsen54Q8C2A2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.23■□□□□ 0.03
Tsen54Q8C2A2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tsen54Q8C2A2 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tsen54Q8C2A2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
Tsen54Q8C2A2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tsen54Q8C2A2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tsen54Q8C2A2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Tsen54Q8C2A2 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.22■□□□□ 0.03
Tsen54Q8C2A2 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms