Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Ska3Q8C263 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ska3Q8C263 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.17■□□□□ 0.34
Ska3Q8C263 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ska3Q8C263 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.17■□□□□ 0.34
Ska3Q8C263 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ska3Q8C263 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ska3Q8C263 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ska3Q8C263 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ska3Q8C263 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ska3Q8C263 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ska3Q8C263 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ska3Q8C263 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ska3Q8C263 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.16■□□□□ 0.34
Ska3Q8C263 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ska3Q8C263 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ska3Q8C263 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ska3Q8C263 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ska3Q8C263 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ska3Q8C263 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ska3Q8C263 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ska3Q8C263 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ska3Q8C263 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ska3Q8C263 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ska3Q8C263 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ska3Q8C263 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ska3Q8C263 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ska3Q8C263 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ska3Q8C263 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Ska3Q8C263 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ska3Q8C263 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ska3Q8C263 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.15■□□□□ 0.34
Ska3Q8C263 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ska3Q8C263 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ska3Q8C263 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Ska3Q8C263 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ska3Q8C263 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.15■□□□□ 0.34
Ska3Q8C263 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.15■□□□□ 0.34
Ska3Q8C263 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Ska3Q8C263 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Ska3Q8C263 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.15■□□□□ 0.34
Ska3Q8C263 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.15■□□□□ 0.34
Ska3Q8C263 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ska3Q8C263 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ska3Q8C263 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Ska3Q8C263 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Ska3Q8C263 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.14■□□□□ 0.33
Ska3Q8C263 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ska3Q8C263 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ska3Q8C263 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ska3Q8C263 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ska3Q8C263 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ska3Q8C263 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.14■□□□□ 0.33
Ska3Q8C263 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ska3Q8C263 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ska3Q8C263 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ska3Q8C263 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ska3Q8C263 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ska3Q8C263 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Ska3Q8C263 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ska3Q8C263 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ska3Q8C263 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ska3Q8C263 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Ska3Q8C263 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ska3Q8C263 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ska3Q8C263 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ska3Q8C263 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ska3Q8C263 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ska3Q8C263 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ska3Q8C263 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ska3Q8C263 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.13■□□□□ 0.33
Ska3Q8C263 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ska3Q8C263 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ska3Q8C263 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.13■□□□□ 0.33
Ska3Q8C263 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ska3Q8C263 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ska3Q8C263 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ska3Q8C263 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.13■□□□□ 0.33
Ska3Q8C263 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ska3Q8C263 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.12■□□□□ 0.33
Ska3Q8C263 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ska3Q8C263 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ska3Q8C263 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ska3Q8C263 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.12■□□□□ 0.33
Ska3Q8C263 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ska3Q8C263 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.12■□□□□ 0.33
Ska3Q8C263 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ska3Q8C263 Gm26524-201ENSMUST00000192339 390 ntBASIC17.12■□□□□ 0.33
Ska3Q8C263 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.12■□□□□ 0.33
Ska3Q8C263 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ska3Q8C263 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ska3Q8C263 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ska3Q8C263 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ska3Q8C263 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ska3Q8C263 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ska3Q8C263 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ska3Q8C263 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ska3Q8C263 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ska3Q8C263 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ska3Q8C263 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms