Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cpne1Q8C166 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne1Q8C166 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne1Q8C166 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne1Q8C166 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Cpne1Q8C166 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cpne1Q8C166 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne1Q8C166 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne1Q8C166 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne1Q8C166 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.07■□□□□ 0.32
Cpne1Q8C166 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne1Q8C166 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne1Q8C166 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cpne1Q8C166 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cpne1Q8C166 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne1Q8C166 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne1Q8C166 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.07■□□□□ 0.32
Cpne1Q8C166 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpne1Q8C166 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne1Q8C166 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne1Q8C166 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne1Q8C166 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne1Q8C166 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne1Q8C166 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cpne1Q8C166 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne1Q8C166 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne1Q8C166 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne1Q8C166 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne1Q8C166 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Cpne1Q8C166 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne1Q8C166 Gm6211-202ENSMUST00000167849 925 ntBASIC17.06■□□□□ 0.32
Cpne1Q8C166 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne1Q8C166 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne1Q8C166 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne1Q8C166 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne1Q8C166 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.05■□□□□ 0.32
Cpne1Q8C166 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne1Q8C166 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne1Q8C166 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne1Q8C166 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne1Q8C166 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne1Q8C166 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne1Q8C166 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne1Q8C166 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Cpne1Q8C166 Gm13148-201ENSMUST00000118892 745 ntBASIC17.05■□□□□ 0.32
Cpne1Q8C166 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.05■□□□□ 0.32
Cpne1Q8C166 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.05■□□□□ 0.32
Cpne1Q8C166 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne1Q8C166 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne1Q8C166 Gm10602-201ENSMUST00000098239 609 ntBASIC17.05■□□□□ 0.32
Cpne1Q8C166 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Cpne1Q8C166 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.05■□□□□ 0.32
Cpne1Q8C166 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Cpne1Q8C166 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.05■□□□□ 0.32
Cpne1Q8C166 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.05■□□□□ 0.32
Cpne1Q8C166 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne1Q8C166 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.04■□□□□ 0.32
Cpne1Q8C166 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cpne1Q8C166 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
Cpne1Q8C166 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.04■□□□□ 0.32
Cpne1Q8C166 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Cpne1Q8C166 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cpne1Q8C166 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Cpne1Q8C166 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cpne1Q8C166 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpne1Q8C166 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpne1Q8C166 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cpne1Q8C166 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpne1Q8C166 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne1Q8C166 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne1Q8C166 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne1Q8C166 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne1Q8C166 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne1Q8C166 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne1Q8C166 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.03■□□□□ 0.32
Cpne1Q8C166 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne1Q8C166 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne1Q8C166 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne1Q8C166 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.03■□□□□ 0.32
Cpne1Q8C166 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.03■□□□□ 0.32
Cpne1Q8C166 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cpne1Q8C166 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne1Q8C166 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne1Q8C166 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.02■□□□□ 0.32
Cpne1Q8C166 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne1Q8C166 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne1Q8C166 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne1Q8C166 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne1Q8C166 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne1Q8C166 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.02■□□□□ 0.32
Cpne1Q8C166 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Cpne1Q8C166 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne1Q8C166 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Cpne1Q8C166 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cpne1Q8C166 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cpne1Q8C166 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cpne1Q8C166 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpne1Q8C166 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.01■□□□□ 0.31
Cpne1Q8C166 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cpne1Q8C166 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms