Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trerf1Q8BXJ2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trerf1Q8BXJ2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trerf1Q8BXJ2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trerf1Q8BXJ2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Trerf1Q8BXJ2 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trerf1Q8BXJ2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.14■□□□□ 0.65
Trerf1Q8BXJ2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Trerf1Q8BXJ2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trerf1Q8BXJ2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.14■□□□□ 0.65
Trerf1Q8BXJ2 Gm29257-201ENSMUST00000186115 639 ntBASIC19.14■□□□□ 0.65
Trerf1Q8BXJ2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trerf1Q8BXJ2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.14■□□□□ 0.65
Trerf1Q8BXJ2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.14■□□□□ 0.65
Trerf1Q8BXJ2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trerf1Q8BXJ2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trerf1Q8BXJ2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trerf1Q8BXJ2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trerf1Q8BXJ2 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trerf1Q8BXJ2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trerf1Q8BXJ2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trerf1Q8BXJ2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trerf1Q8BXJ2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trerf1Q8BXJ2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trerf1Q8BXJ2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trerf1Q8BXJ2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trerf1Q8BXJ2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trerf1Q8BXJ2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trerf1Q8BXJ2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Trerf1Q8BXJ2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Trerf1Q8BXJ2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trerf1Q8BXJ2 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trerf1Q8BXJ2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trerf1Q8BXJ2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trerf1Q8BXJ2 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.12■□□□□ 0.65
Trerf1Q8BXJ2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trerf1Q8BXJ2 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.12■□□□□ 0.65
Trerf1Q8BXJ2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.12■□□□□ 0.65
Trerf1Q8BXJ2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trerf1Q8BXJ2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trerf1Q8BXJ2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trerf1Q8BXJ2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trerf1Q8BXJ2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trerf1Q8BXJ2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.12■□□□□ 0.65
Trerf1Q8BXJ2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trerf1Q8BXJ2 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Trerf1Q8BXJ2 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trerf1Q8BXJ2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trerf1Q8BXJ2 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Trerf1Q8BXJ2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trerf1Q8BXJ2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trerf1Q8BXJ2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trerf1Q8BXJ2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trerf1Q8BXJ2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trerf1Q8BXJ2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.11■□□□□ 0.65
Trerf1Q8BXJ2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trerf1Q8BXJ2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Trerf1Q8BXJ2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trerf1Q8BXJ2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trerf1Q8BXJ2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trerf1Q8BXJ2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trerf1Q8BXJ2 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Gm6420-201ENSMUST00000193885 723 ntBASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Trerf1Q8BXJ2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trerf1Q8BXJ2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trerf1Q8BXJ2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trerf1Q8BXJ2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
Trerf1Q8BXJ2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trerf1Q8BXJ2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trerf1Q8BXJ2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trerf1Q8BXJ2 Nespas-201ENSMUST00000143738 1083 ntBASIC19.09■□□□□ 0.65
Trerf1Q8BXJ2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Trerf1Q8BXJ2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.09■□□□□ 0.65
Trerf1Q8BXJ2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trerf1Q8BXJ2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trerf1Q8BXJ2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Trerf1Q8BXJ2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trerf1Q8BXJ2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trerf1Q8BXJ2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trerf1Q8BXJ2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms